Strain Report - Rat Genome Database

Name: FHH- Egln3 m1Mcwi
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Advanced Search (OLGA)

Home
Data
ANALYSIS & VISUALIZATION
Diseases
Phenotypes & Models
Genetic Models
Pathways
Community
Curation Web

Search RGD
Grant Resources
Citing RGD
About Us
Contact Us

Genes
QTLs
Strains
Markers
Maps
Ontologies
Sequences
References
FTP Download
Submit Data

Rat GBrowse
VCMap
Variant Visualizer
GViewer
ACP Haplotyper
Genome Scanner
Genome Conflicts
RatMine

Aging
Cancer
Cardiovascular
Diabetes
Hematologic
Immune
Neurological
Obesity
Renal
Respitory
Sensory

Phenotypes
Strains & Models
PhenoMiner Database

Molecular Pathways
Physiological Pathways

Nomenclature
Rat Community Forum (RCF)
Submit Data

Object Edit
Curation Tools
Nomenclature
Score Board
Pipeline Logs
Phenominer
Submitted Strains

General

Strain: FHH-Egln3^m1Mcwi

Symbol:

FHH-Egln3^m1Mcwi

Strain:

FHH-Egln3^m1

Substrain:

Mcwi

Ontology ID:

RS:0001127

Alleles:

Egln3^m1Mcwi

Also known as:

FHH-Egln3m1Mcwi; RRRC:00409

Type:

mutant

Source:

PhysGen, Rat Resource and Research Center

Origin:

Male founders are injected with ENU (N-ethyl-N-nitrosourea) and harem bred to females. The pups are genetically screened using the TILLING assay (an enzyme-based heteroduplex cleavage assay) as well as nucleotide sequencing to identify and characterize target genes possessing ENU-induced mutations. E60G mutation is generated.

Last Known Status:

Cryopreserved Sperm (as of 2017-01-26)

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	6	75,050,329 - 75,075,795	RGD_MAPPER_PIPELINE	Rnor6.0
Rnor_5.0	6	84,592,894 - 84,618,360	RGD_MAPPER_PIPELINE	Rnor5.0
RGSC_v3.4	6	74,451,038 - 74,476,506	RGD_MAPPER_PIPELINE	RGSC3.4

Annotation (Toggle Annotation Detail/Summary View)

Phenotype Values via Phenominer

Related Phenotype Data for Term "FHH-Egln3m1Mcwi" (RS:0001127)

Rat Strains:

FHH-Egln3m1Mcwi

Clinical Measurements:

acetylcholine-induced blood vessel dilation expressed as percent of force at maximum constriction
blood eosinophil count
blood hemoglobin level
blood lymphocyte count
blood monocyte count
blood neutrophil count
body length, nose to rump
body length, nose to tail
body weight
concentration of acetylcholine at which the reduction in force during dilation of a blood vessel is half the maximum value (EC50)
concentration of phenylephrine at which the force of blood vessel contraction is half the maximum value (EC50)
heart left ventricle wet weight
heart right ventricle wet weight
heart wet weight
hematocrit
left kidney wet weight
logarithm of the concentration of acetylcholine at which the reduction in force during dilation of a blood vessel is half the maximum value (Log EC50)
logarithm of the concentration of phenylephrine at which the force of blood vessel contraction is half the maximum value (Log EC50)
maximum contractile force per wet weight of aorta
mean corpuscular hemoglobin concentration
mean corpuscular hemoglobin level
mean corpuscular volume
plasma anion gap
plasma creatinine level
red blood cell count
serum alanine aminotransferase activity level
serum albumin level
serum alkaline phosphatase activity level
serum aspartate aminotransferase activity level
serum bicarbonate level
serum calcium level
serum chloride level
serum globulin level
serum glucose level
serum phosphate level
serum potassium level
serum sodium level
serum total cholesterol level
serum total protein level
serum urea nitrogen level
total serum bilirubin level
total white blood cell count

Experimental Conditions:

acetylcholine
controlled sodium content diet
drug dose time series
fasting
phenylephrine
potassium ion

Measurement Methods:

automated blood cell counting method
automated plasma creatinine analysis
digital scale post excision weight measurement
flame atomic emission spectrometry
in vivo ruler method
standard blood chemistry panel
whole body digital scale
wire myography using a Digi-Med tissue force analysis system with force transducer

Experimental Data Annotations

Rat Strain

FHH-Egln3m1Mcwi (IEA)

Phenotype Values via Phenominer

Options:

View chart

Download data table

View expanded data table

Clinical Measurement

body weight

red blood cell count

blood hemoglobin level

blood neutrophil count

blood lymphocyte count

blood monocyte count

blood eosinophil count

hematocrit

mean corpuscular volume

plasma anion gap

heart wet weight

heart left ventricle wet weight

heart right ventricle wet weight

body length, nose to tail

body length, nose to rump

left kidney wet weight

mean corpuscular hemoglobin level

mean corpuscular hemoglobin concentration

serum total cholesterol level

total white blood cell count

total serum bilirubin level

serum bicarbonate level

serum chloride level

serum potassium level

serum sodium level

serum calcium level

plasma creatinine level

serum phosphate level

serum glucose level

serum albumin level

serum alanine aminotransferase activity level

serum alkaline phosphatase activity level

serum aspartate aminotransferase activity level

serum urea nitrogen level

serum total protein level

concentration of phenylephrine at which the force of blood vessel contraction is half the maximum value (EC50)

logarithm of the concentration of phenylephrine at which the force of blood vessel contraction is half the maximum value (Log EC50)

concentration of acetylcholine at which the reduction in force during dilation of a blood vessel is half the maximum value (EC50)

logarithm of the concentration of acetylcholine at which the reduction in force during dilation of a blood vessel is half the maximum value (Log EC50)

maximum contractile force per wet weight of aorta

acetylcholine-induced blood vessel dilation expressed as percent of force at maximum constriction

serum globulin level

References - curated

1.	Personal Communication with Rat Resource & Research Center
2.	PhysGen strains
3.	RGD Automated Pipelines

Region

Additional Information

Nomenclature History

Date	Current Symbol	Previous Symbol	Description	Reference	Status
2014-03-21	FHH-Egln3^m1Mcwi	FHH-Egln3^m1Mcwi	Symbol updated	68687	APPROVED
2014-03-21	FHH-Egln3^m1Mcwi	FHH-Egln3^m1Mcwi	Symbol updated	68687	APPROVED
2014-03-21	FHH-Egln3^m1Mcwi	FHH-Egln3^m1Mcwi	Name updated	68913	APPROVED
2014-03-21	FHH-Egln3^m1Mcwi	FHH-Egln3^m1Mcwi	Name updated	68913	APPROVED
2012-04-17	FHH-Egln3^m1Mcwi	FHH-Egln3^m1Mcwi	Name updated	68913	APPROVED
2012-04-17	FHH-Egln3^m1Mcwi	FHH-Egln3^m1Mcwi	Name updated	68913	APPROVED

More on this Strain
	Strain Nomenclature
	Strain Registration

RGD Object Information
RGD ID:	1579694
Created:	2006-05-04
Species:	Rattus norvegicus
Last Modified:	2017-01-26
Status:	ACTIVE

Functional Annotation unavailable	Annotation Distribution unavailable	Genomic Variants unavailble for Mouse Genomic Variants unavailable
Functional Annotation	Annotation Distribution	Genomic Variants

Protein-Protein Interactions unavailable	Genome Viewer unavailable	Damaging Variants unavailble for Mouse Damaging Variants unavailable
Protein-Protein Interactions	Genome Viewer	Damaging Variants

Annotation Comparison unavailable	OLGA unavailable
Annotation Comparison	OLGA	Excel (Download)

Create Name:

Description:

Strain: FHH-Egln3m1Mcwi

Related Phenotype Data for Term "FHH-Egln3m1Mcwi" (RS:0001127)

Strain: FHH-Egln3^m1Mcwi