Strain Report - Rat Genome Database

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Strain: SS.LEW-(Prlr-D2Rat143)/Ayd

Symbol: SS.LEW-(Prlr-D2Rat143)/Ayd
Strain: SS.LEW-(Prlr-D2Rat143)
Substrain: Ayd
RGD ID: 1549808
Citation ID: RRID:RGD_1549808
Ontology ID: RS:0000885
Also Known As: C2S.L3; SS.LEW-(Prlr-D2Rat143)/Ayd
Type: congenic
Available Source: Not Available
Origination: Research Centre Hospitalier de l'Universite de Montreal, Quebec, Canada
Description: Congenic strain was created from a SS/Jr parental strain
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8260,861,391 - 105,448,034RGD_MAPPER_PIPELINE
mRatBN7.2259,134,147 - 103,519,040RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0260,131,410 - 106,156,987RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0284,360,850 - 125,885,146RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4259,507,966 - 106,236,206RGD_MAPPER_PIPELINERGSC3.4





Phenotype Values via Phenominer Click to see Annotation Detail View

Related Phenotype Data for Term "SS.LEW-(Prlr-D2Rat143)/Ayd" (RS:0000885)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table

Clinical Measurement
mean arterial blood pressure

References

References - curated
# Reference Title Reference Citation
1. Severe hypertension caused by alleles from normotensive Lewis for a quantitative trait locus on Chromosome 2. Eliopoulos V, etal., Physiol Genomics 2005 Apr 12;.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 2 / 1 (D2Rat143)
Rat AssemblyChrPosition (strand)Source
GRCr82105,447,770 - 105,448,034 (+)Marker Load Pipeline
mRatBN7.22103,518,774 - 103,519,040 (+)MAPPER
Rnor_6.02106,156,724 - 106,156,987NCBI
Rnor_5.02125,884,883 - 125,885,146UniSTS
RGSC_v3.42106,235,943 - 106,236,206UniSTS
RGSC_v3.42106,235,944 - 106,236,206RGD
RGSC_v3.12106,180,906 - 106,181,168RGD
Celera298,871,348 - 98,871,611UniSTS
RH 3.4 Map2737.6RGD
RH 3.4 Map2737.6UniSTS
SHRSP x BN Map237.6698UniSTS
SHRSP x BN Map237.6698RGD

Flank 1 / 1 (Prlr)
Rat AssemblyChrPosition (strand)Source
GRCr8260,861,391 - 61,051,883 (+)NCBI
mRatBN7.2259,134,147 - 59,324,719 (+)NCBI
mRatBN7.2 Ensembl259,134,588 - 59,324,718 (+)Ensembl
UTH_Rnor_SHR_Utx266,245,300 - 66,425,431 (+)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.0264,366,825 - 64,546,955 (+)NCBI
UTH_Rnor_WKY_Bbb_1.0259,368,154 - 59,548,295 (+)NCBI
Rnor_6.0260,131,410 - 60,325,686 (+)NCBI
Rnor_6.0 Ensembl260,131,776 - 60,325,692 (+)Ensembl
Rnor_5.0284,360,850 - 84,554,681 (-)NCBI
RGSC_v3.4259,507,966 - 59,701,221 (+)NCBI
RGSC_v3.1259,485,049 - 59,629,454 (+)NCBI
Celera259,347,111 - 59,534,658 (-)NCBI
Cytogenetic Map2q16NCBI

Additional Information