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Strain Registration

Strain: BUF.ACI-(D3Rat56-D3Rat83)/Ncc

Symbol: BUF.ACI-(D3Rat56-D3Rat83)/Ncc
Strain: BUF.ACI-(D3Rat56-D3Rat83)
Substrain: Ncc
RGD ID: 1549806
Citation ID: RRID:RGD_1549806
Ontology ID: RS:0000466
Also Known As: BUF.ACI-Gcr2/Ncc; BUF.ACI-Gcr2/Ncc; BUF.ACI-(D3Rat56-D3Rat83)/Ncc; NBRP Rat No: 0096; BUF.ACI-(D3Rat56-D3Rat83)/Ncc; BUF.ACI-Gcr2
Type: congenic
Available Source: National BioResource Project for the Rat in Japan
Origination: Carcinogenesis Division, National Cancer Center Research Institute, Chuo-ku, Tokyo, Japan
Description: This strain was produced by speed congenic methods in which several generations of backcrossing were carried out in order to transfer the ACI chromosome 3 region into the BUF/Nac background recipient strain
Coat Color: Albino
Inbred Generations: F12
Last Known Status: Cryopreserved Embryo; Cryopreserved Sperm
Research Usage Cancer
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.238,227,194 - 45,391,731RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.032,631,421 - 46,996,487RGD_MAPPER_PIPELINERnor6.0
Rnor_5.032,612,834 - 52,104,192RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.433,577,905 - 42,635,088RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines
3. Expression Quantitative Trait Loci Analysis of 13 Genes in the Rat Prostate. Yamashita S, etal., Genetics 2005 Aug 3;.

Region

Position Markers

Flank 1 / 1 (D3Rat56)
Rat AssemblyChrPosition (strand)Source
mRatBN7.238,227,194 - 8,227,391 (+)MAPPER
Rnor_6.032,631,421 - 2,631,617NCBI
Rnor_5.032,612,834 - 2,613,030UniSTS
RGSC_v3.433,577,905 - 3,578,102RGD
RGSC_v3.433,577,906 - 3,578,102UniSTS
RGSC_v3.133,577,811 - 3,578,194RGD
Celera33,052,299 - 3,052,495UniSTS
SHRSP x BN Map32.4699UniSTS
SHRSP x BN Map32.4699RGD
FHH x ACI Map32.53RGD

Flank 2 / 1 (D3Rat83)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2345,391,621 - 45,391,731 (+)MAPPER
Rnor_6.0346,996,378 - 46,996,487NCBI
Rnor_5.0352,104,083 - 52,104,192UniSTS
RGSC_v3.4342,634,978 - 42,635,088RGD
RGSC_v3.4342,634,979 - 42,635,088UniSTS
RGSC_v3.1342,531,351 - 42,531,460RGD
Celera345,085,785 - 45,085,894UniSTS
RH 3.4 Map3600.83UniSTS
RH 3.4 Map3600.83RGD
RH 2.0 Map3360.8RGD
SHRSP x BN Map332.8199RGD
Cytogenetic Map3q21UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_reproduction Good breeding performance. 1302502

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-05-09 BUF.ACI-(D3Rat56-D3Rat83)/Ncc    BUF.ACI-(D3Rat56-D3Rat83)/Ncc    Name updated 68913 APPROVED
2012-05-09 BUF.ACI-(D3Rat56-D3Rat83)/Ncc    BUF.ACI-(D3Rat56-D3Rat83)/Ncc    Name updated 68913 APPROVED