Strain Report - Rat Genome Database

Name: SS- Xdh em1Mcwi
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Symbol:

SS-Xdh^em1Mcwi

Strain:

SS-Xdh^em1

Substrain:

Mcwi

RGD ID:

14398479

Citation ID:

RRID:RGD_14398479

Ontology ID:

N/A

Alleles:

Also Known As:

SS-Xdh^[em1Mcwi]

Type:

mutant

Available Source:

Contact MCW rat distribution at mcwcustomrats@mcw.edu

Origination:

MCW Gene Editing Rat Resource Center

Description:

CRISPR/Cas9 system was used to introduce a 7-bp deletion in exon 4 of rat Xdh gene in the SS/JrHsdMcwi embryos.

Last Known Status:

Cryopreserved Sperm (as of 2021-11-03)

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	21,530,463 - 21,592,172	RGD_MAPPER_PIPELINE	mRatBN7.2
Rnor_6.0	6	25,149,570 - 25,211,273	RGD_MAPPER_PIPELINE	Rnor6.0
Rnor_5.0	6	34,996,983 - 35,059,195	RGD_MAPPER_PIPELINE	Rnor5.0
RGSC_v3.4	6	21,417,685 - 21,590,015	RGD_MAPPER_PIPELINE	RGSC3.4

References

Region

Additional Information

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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