Strain Report - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: WKY-Gja5em1Mcwi

Symbol: WKY-Gja5em1Mcwi
Strain: WKY-Gja5em1
Substrain: Mcwi
RGD ID: 13825143
Citation ID: RRID:RGD_13825143
Ontology ID: RS:0004865
Alleles: Gja5em1Mcwi
Also Known As: WKY-Gja5^[em1Mcwi]
Type: mutant
Available Source: Contact MCW rat distribution at mcwcustomrats@mcw.edu
Origination: MCW Gene Editing Rat Resource Center
Description: CRISPR/Cas9 system was used to introduce a 1-bp substitution and premature stop codon in exon 2 of rat Gja5 gene of WKY/NCrl rat embryos.
Last Known Status: Cryopreserved Sperm (as of 2021-11-03)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22184,602,407 - 184,621,952RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.02199,181,973 - 199,181,973RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02218,648,368 - 218,669,354RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.42191,824,118 - 191,843,867RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Data registered by Dr. Melinda Dwinell’s group Personal communication between Dr. Melinda Dwinell’s group and the RGD curators

Region

Allelic Variants
Name Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Assembly
Gja5em1Mcwi-var1 chr2 199181973 199181973 G T delins Rnor_6.0

Additional Information