Strain Report - Rat Genome Database

Name: FHH- Mybphl em1Mcwi
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Strain Registration

General

Strain: FHH-Mybphl^em1Mcwi

Symbol:

FHH-Mybphl^em1Mcwi

Strain:

FHH-Mybphl^em1

Substrain:

Mcwi

RGD ID:

13800838

Citation ID:

RRID:RGD_13800838

Ontology ID:

RS:0004662

Alleles:

Mybphl^em1Mcwi

Type:

mutant

Source:

MCW Gene Editing Rat Resource Center; Contact MCW rat distribution at mcwcustomrats@mcw.edu

Origin:

CRISPR/Cas9 system was used to introduce a 2-bp deletion in exon 1 of rat Mybphl gene in the FHH/EurMcwi embryos.

Last Known Status:

Cryopreserved Sperm (as of 2021-11-03)

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	196,005,516 - 196,005,517	RGD_MAPPER_PIPELINE	mRatBN7.2
Rnor_6.0	2	211,158,902 - 211,173,036	RGD_MAPPER_PIPELINE	Rnor6.0
Rnor_5.0	2	230,628,901 - 230,643,002	RGD_MAPPER_PIPELINE	Rnor5.0
RGSC_v3.4	2	203,934,530 - 203,948,031	RGD_MAPPER_PIPELINE	RGSC3.4

Annotation Click to see Annotation Detail View

References

References - curated

#	Reference Title	Reference Citation
1.	Data registered by Dr. Melinda Dwinell’s group	Personal communication between Dr. Melinda Dwinell’s group and the RGD curators

Region

Allelic Variants

Name	Chromosome	Start Pos	End Pos	Reference Nucleotide	Variant Nucleotide	Variant Type	Assembly
Mybphlem1Mcwi-var1	chr2	196005516	196005517	GA	-	deletion	mRatBN7.2

Additional Information

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Strain: FHH-Mybphlem1Mcwi

Strain: FHH-Mybphl^em1Mcwi