Strain Report - Rat Genome Database
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Strain: DA.F344-(D10Mit9-D10Rat11)/Nsi

Symbol: DA.F344-(D10Mit9-D10Rat11)/Nsi
Strain: DA.F344-(D10Mit9-D10Rat11)
Substrain: Nsi
RGD ID: 1359004
RRID: RGD_1359004
Ontology ID: RS:0000218
Also known as: Cia5e; DA.F344-(D10Rat37-D10Wox22)/Nsi; DA.F344-(D10Mit9-D10Rat11)/Nsi
Type: congenic
Source: North Shore-Long Island Jewish Research Institute,350 Community Drive - Manhasset, NY 11030
Origin: Congenic strain created by backcrossing DA/BklArbNsi and F344/Hsd
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01031,919,397 - 99,492,409RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01031,740,635 - 99,184,250RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41031,931,622 - 100,633,982RGD_MAPPER_PIPELINERGSC3.4





Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References


Region

Position Markers

Flank 1 / 1 (D10Mit9)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01031,919,397 - 31,919,634NCBI
Rnor_5.01031,740,635 - 31,740,872UniSTS
RGSC_v3.41031,931,622 - 31,931,860RGD
RGSC_v3.41031,931,623 - 31,931,860UniSTS
RGSC_v3.11031,932,672 - 31,932,909RGD
Celera1030,668,756 - 30,668,993UniSTS
Cytogenetic Map10 RGD
RH 3.4 Map10340.71UniSTS
RH 3.4 Map10340.71RGD
RH 2.0 Map10373.7RGD

Flank 2 / 1 (D10Rat11)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01099,492,217 - 99,492,409NCBI
Rnor_5.01099,184,058 - 99,184,250UniSTS
RGSC_v3.410100,633,512 - 100,633,982RGD
RGSC_v3.410100,633,654 - 100,633,848UniSTS
RGSC_v3.110100,648,024 - 100,648,218RGD
Celera1094,766,403 - 94,766,596UniSTS
RH 3.4 Map101084.8UniSTS
RH 3.4 Map101084.8RGD
RH 2.0 Map101218.2RGD
SHRSP x BN Map1077.15RGD
FHH x ACI Map1082.4RGD
Strain QTL Data
Symbol Name Trait
Cia29 Collagen induced arthritis QTL 29 joint integrity trait   (VT:0010548)    

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-09-06 DA.F344-(D10Mit9-D10Rat11)/Nsi    DA.F344-(D10Rat37-D10Wox22)/Nsi    Symbol updated 68687 APPROVED
2013-09-06 DA.F344-(D10Mit9-D10Rat11)/Nsi    DA.F344-(D10Rat37-D10Wox22)/Nsi    Name updated 68913 APPROVED
2013-09-06 DA.F344-(D10Mit9-D10Rat11)/Nsi    DA.F344-(D10Rat37-D10Wox22)/Nsi    Symbol updated 68687 APPROVED
2013-09-06 DA.F344-(D10Mit9-D10Rat11)/Nsi    DA.F344-(D10Rat37-D10Wox22)/Nsi    Name updated 68913 APPROVED