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Strain Registration

Strain: DA.F344-(D10Arb27-D10Rat6)/Nsi

Symbol: DA.F344-(D10Arb27-D10Rat6)/Nsi
Strain: DA.F344-(D10Arb27-D10Rat6)
Substrain: Nsi
RGD ID: 1359000
Citation ID: RRID:RGD_1359000
Ontology ID: RS:0000217
Also Known As: Cia5b; DA.F344-(D10Rat24-D10Rat11)/Nsi; DA.F344-(D10Arb27-D10Rat6)/Nsi
Type: congenic
Available Source: Not Available
Origination: North Shore-Long Island Jewish Research Institute,350 Community Drive - Manhasset, NY 11030
Description: Congenic strain created by backcrossing DA/BklArbNsi and F344/Hsd
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21065,927,233 - 101,436,010RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01068,305,037 - 105,078,045RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01067,971,352 - 104,746,310RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41069,160,380 - 106,310,957RGD_MAPPER_PIPELINERGSC3.4





Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. The non-major histocompatibility complex quantitative trait locus Cia10 contains a major arthritis gene and regulates disease severity, pannus formation, and joint damage. Brenner M, etal., Arthritis Rheum 2005 Jan;52(1):322-32.
2. The non-MHC quantitative trait locus Cia5 contains three major arthritis genes that differentially regulate disease severity, pannus formation, and joint damage in collagen- and pristane-induced arthritis. Brenner M, etal., J Immunol 2005 Jun 15;174(12):7894-903.
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D10Arb27)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21065,927,233 - 65,927,370 (+)MAPPER
Rnor_6.01068,305,037 - 68,305,173NCBI
Rnor_5.01067,971,352 - 67,971,488UniSTS
RGSC_v3.41069,160,380 - 69,160,517RGD
RGSC_v3.41069,160,381 - 69,160,517UniSTS
RGSC_v3.11069,174,003 - 69,174,140RGD
Celera1064,883,710 - 64,883,846UniSTS
SHRSP x BN Map1047.6099UniSTS
SHRSP x BN Map1047.6099RGD
FHH x ACI Map1053.73RGD
Cytogenetic Map10q26UniSTS

Flank 2 / 1 (D10Rat6)
Rat AssemblyChrPosition (strand)Source
mRatBN7.210101,435,864 - 101,436,010 (+)MAPPER
Rnor_6.010105,077,900 - 105,078,045NCBI
Rnor_5.010104,746,165 - 104,746,310UniSTS
RGSC_v3.410106,310,811 - 106,310,957RGD
RGSC_v3.410106,310,812 - 106,310,957UniSTS
RGSC_v3.110106,325,316 - 106,325,461RGD
Celera10100,009,136 - 100,009,281UniSTS
RH 3.4 Map101169.7RGD
RH 3.4 Map101169.7UniSTS
RH 2.0 Map101302.4RGD
SHRSP x BN Map1088.11RGD
Cytogenetic Map10q32.3UniSTS

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-09-06 DA.F344-(D10Arb27-D10Rat6)/Nsi    DA.F344-(D10Rat24-D10Rat11)/Nsi    Symbol updated 68687 APPROVED
2013-09-06 DA.F344-(D10Arb27-D10Rat6)/Nsi    DA.F344-(D10Rat24-D10Rat11)/Nsi    Name updated 68913 APPROVED
2013-09-06 DA.F344-(D10Arb27-D10Rat6)/Nsi    DA.F344-(D10Rat24-D10Rat11)/Nsi    Symbol updated 68687 APPROVED
2013-09-06 DA.F344-(D10Arb27-D10Rat6)/Nsi    DA.F344-(D10Rat24-D10Rat11)/Nsi    Name updated 68913 APPROVED