Strain Report - Rat Genome Database

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Strain: WKY.SHR-(D2Rat174-D2Rat28)

Symbol: WKY.SHR-(D2Rat174-D2Rat28)
Strain: WKY.SHR-(D2Rat174-D2Rat28)
RGD ID: 1358999
RRID: RGD_1358999
Ontology ID: RS:0001029
Also known as: 2a-B; WKY.SHR-(D2Rat174-D2Rat28)
Type: congenic
Source: Dept Pharmacology, Univ. of California San Diego, La Jolla, CA USA
Origin: This congenic substrain was contructed by repeated backcrossing of congenic strain WKY.SHR-(D2Rat174-D2Rat185) to parental strain WKY/NCrl
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2259,744,817 - 104,815,148RGD_MAPPER_PIPELINE
Rnor_6.0260,746,052 - 107,083,569RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0283,930,202 - 126,824,737RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4260,124,623 - 107,574,826RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
1. Alemayehu A, etal., Physiol Genomics 2002 Sep 3;10(3):199-210.
2. RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D2Rat174)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2259,744,817 - 59,745,001 (+)MAPPER
Rnor_6.0260,746,052 - 60,746,235NCBI
Rnor_5.0283,930,202 - 83,930,385UniSTS
RGSC_v3.4260,124,623 - 60,124,807RGD
RGSC_v3.4260,124,624 - 60,124,807UniSTS
RGSC_v3.1260,052,788 - 60,053,041RGD
Celera258,929,472 - 58,929,659UniSTS
SHRSP x BN Map227.4798RGD
SHRSP x BN Map227.4798UniSTS

Flank 2 / 1 (D2Rat28)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22104,814,877 - 104,815,148 (+)MAPPER
Rnor_6.02107,083,299 - 107,083,569NCBI
Rnor_5.02126,824,467 - 126,824,737UniSTS
RGSC_v3.42107,574,469 - 107,574,826RGD
RGSC_v3.42107,574,499 - 107,574,769UniSTS
RGSC_v3.12107,519,431 - 107,519,788RGD
Celera2100,131,211 - 100,131,482UniSTS
RH 3.4 Map2737.7RGD
RH 3.4 Map2737.7UniSTS
SHRSP x BN Map238.7498UniSTS
SHRSP x BN Map238.7498RGD
FHH x ACI Map250.0599RGD
Cytogenetic Map2q24UniSTS
Strain QTL Data
Symbol Name Trait
Bp274 Blood pressure QTL 274 arterial blood pressure trait   (VT:2000000)    

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-08-28 WKY.SHR-(D2Rat174-D2Rat28   WKY.SHR-(D2Rat174-D2Rat28   Name updated 68913 APPROVED
2013-08-28 WKY.SHR-(D2Rat174-D2Rat28   WKY.SHR-(D2Rat174-D2Rat28   Name updated 68913 APPROVED