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Strain Registration

Strain: SS.MNS-(D2Mit6-D2Rat303)/Ayd

Symbol: SS.MNS-(D2Mit6-D2Rat303)/Ayd
Strain: SS.MNS-(D2Mit6-D2Rat303)
Substrain: Ayd
RGD ID: 1357978
Citation ID: RRID:RGD_1357978
Ontology ID: RS:0000903
Previously known as: C2S.M2; S.M2; SS.MNS-(D2Mit6-D2Rat303)/Ayd
Type: congenic
Source: Centre Hospitalier de L'Universite de Montreal (CHUM), Montreal, Quebec,Canada
Origin: Congenic strain was created by backcrossing congenic strain SS.MNS-(D2Mit6-Adh1)/Lt strain into the parental Dahl Salt-sensitive (SS) strain
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2276,539,322 - 127,460,910RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0278,321,410 - 135,646,395RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0298,037,122 - 155,130,826RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4277,630,629 - 131,522,430RGD_MAPPER_PIPELINERGSC3.4





Experimental Data Annotations    Click to see Annotation Detail View

Rat Strain
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
SS.MNS-(D2Mit6-D2Rat303)/Ayd  IEA 7241799 RGD 

Vertebrate Trait
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
blood vessel smooth muscle cell quantity  EXP 1357419 RGD 

References

References - curated
# Reference Title Reference Citation
1. Multiple quantitative trait loci for blood pressure interacting epistatically and additively on dahl rat chromosome 2. Dutil J, etal., Hypertension 2005 Apr;45(4):557-64. Epub 2005 Feb 28.
2. A quantitative trait locus for aortic smooth muscle cell number acting independently of blood pressure: implicating the angiotensin receptor AT1B gene as a candidate. Dutil J, etal., Physiol Genomics 2005 Mar 1;.
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D2Mit6)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2276,539,322 - 76,539,510 (+)MAPPER
Rnor_6.0278,466,075 - 78,466,260RGD
Rnor_6.0278,321,410 - 78,321,595RGD
Rnor_5.0298,153,283 - 98,153,468RGD
Rnor_5.0298,037,122 - 98,037,307RGD
RGSC_v3.4277,630,629 - 77,630,814UniSTS
RGSC_v3.1277,561,812 - 77,562,125RGD
Celera272,243,967 - 72,244,152UniSTS
RH 3.4 Map2500.7RGD
RH 3.4 Map2500.7UniSTS
RH 2.0 Map2406.8RGD
SHRSP x BN Map229.4498RGD
Cytogenetic Map2 RGD

Flank 2 / 1 (D2Rat303)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22127,460,743 - 127,460,910 (+)MAPPER
Rnor_6.02135,646,229 - 135,646,395NCBI
Rnor_5.02155,130,660 - 155,130,826UniSTS
RGSC_v3.42131,522,263 - 131,522,430RGD
RGSC_v3.42131,522,264 - 131,522,430UniSTS
RGSC_v3.12131,472,093 - 131,472,404RGD
Celera2124,962,554 - 124,962,720UniSTS
FHH x ACI Map258.8599RGD
FHH x ACI Map258.8599UniSTS
Cytogenetic Map2q26UniSTS
Strain QTL Data
Symbol Name Trait
Smcn1 Smooth muscle cell number QTL 1 blood vessel smooth muscle cell quantity   (VT:0010525)    

Additional Information