Strain Report - Rat Genome Database

Name: WKY- Tph1 em1Mcwi
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Strain Registration

General

Strain: WKY-Tph1^em1Mcwi

Symbol:

WKY-Tph1^em1Mcwi

Strain:

WKY-Tph1^em1Mcwi

Substrain:

Mcwi

RGD ID:

13207595

Citation ID:

RRID:RGD_13207595

Ontology ID:

RS:0004520

Alleles:

Tph1^em1Mcwi

Previously known as:

WKY-Tph1em1Mcwi

Type:

mutant

Source:

MCW Gene Editing Rat Resource Center; Contact MCW rat distribution at mcwcustomrats@mcw.edu

Origin:

CRISPR/Cas9 system was used to introduce a mutation in the Tph1 gene of WKY/NCrl rat embryos. The resulting mutation is a 1-bp deletion in the exon 4 of the Tph1 gene.

Last Known Status:

Cryopreserved Sperm (as of 2021-11-03)

Genotyping Protocol

Download Genotyping Protocol

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	97,157,375 - 97,178,415	RGD_MAPPER_PIPELINE	mRatBN7.2
Rnor_6.0	1	102,669,868 - 102,699,442	RGD_MAPPER_PIPELINE	Rnor6.0
Rnor_5.0	1	103,746,878 - 103,774,100	RGD_MAPPER_PIPELINE	Rnor5.0
RGSC_v3.4	1	97,186,071 - 97,207,551	RGD_MAPPER_PIPELINE	RGSC3.4

Annotation Click to see Annotation Detail View

References

References - curated

#	Reference Title	Reference Citation
1.	Data registered by Dr. Melinda Dwinell’s group	Personal communication between Dr. Melinda Dwinell’s group and the RGD curators

Region

Additional Information

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Strain: WKY-Tph1em1Mcwi

Strain: WKY-Tph1^em1Mcwi