Strain Report - Rat Genome Database

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Strain: OLETF.F344-(D1Rat166-D1Rat90)/Tj

Symbol: OLETF.F344-(D1Rat166-D1Rat90)/Tj
Strain: OLETF.F344-(D1Rat166-D1Rat90)
Substrain: Tj
RGD ID: 1299874
Citation ID: RRID:RGD_1299874
Ontology ID: RS:0000624
Also known as: Intramuscular fat-minor; OLETF.F344-(D1Rat166-D1Rat90)/Kyo; F344.OLETF-Imfm; OLETF.F344-(D1Rat166-D1Rat90)/Tj;NBRP Rat No: 0065;O.F-Nidd6/F344; OLETF.F344-(D1Rat166-D1Rat90)/Tj
Type: congenic
Source: Laboratory of Animal Breeding and Genetics, Kyoto University, Kyoto, Japan National BioResource Project for the Rat in Japan
Origin: Female OLETF were crossed with male F344 rats. The male F1 progeny were backcrossed with female F344 to produce the BC1. Five generations of backcross matings were made between selective males from the BC1 and F344 females to produce the new congenic strain. Sucessive generations were maintained by a standard brother-sister mating protocol.
Inbred Generations: F5
Last Known Status: Cryopreserved Embryo
Research Usage Diabetes Obesity
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21248,393,012 - 259,647,894RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01269,279,863 - 281,795,785RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01276,721,459 - 289,137,268RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41255,026,793 - 267,111,153RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
1. Personal Communication with NBRP
2. RGD Automated Pipelines
3. Tanomura H, etal., Exp Anim 2003 Jul;52(4):303-8.

Region

Position Markers

Flank 1 / 1 (D1Rat166)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21248,393,012 - 248,393,157 (+)MAPPER
Rnor_6.01269,279,863 - 269,280,007NCBI
Rnor_5.01276,721,459 - 276,721,603UniSTS
RGSC_v3.41255,026,793 - 255,026,938RGD
RGSC_v3.41255,026,794 - 255,026,938UniSTS
RGSC_v3.11255,292,700 - 255,292,844RGD
Celera1244,134,087 - 244,134,231UniSTS
RH 3.4 Map11652.1UniSTS
RH 3.4 Map11652.1RGD
RH 2.0 Map11263.7RGD
SHRSP x BN Map1141.35RGD

Flank 2 / 1 (D1Rat90)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21259,647,732 - 259,647,894 (+)MAPPER
Rnor_6.01281,795,624 - 281,795,785NCBI
Rnor_5.01289,137,107 - 289,137,268UniSTS
RGSC_v3.41267,110,921 - 267,111,153RGD
RGSC_v3.41267,110,926 - 267,111,087UniSTS
RGSC_v3.11267,322,011 - 267,322,172RGD
Celera1255,291,309 - 255,291,470UniSTS
RH 3.4 Map11708.8UniSTS
RH 3.4 Map11708.8RGD
RH 2.0 Map11313.1999RGD
SHRSP x BN Map1148.15RGD

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-05-08 OLETF.F344-(D1Rat166-D1Rat90)/Tj    OLETF.F344-(D1Rat166-D1Rat90)/Tj    Name updated 68913 APPROVED