Strain Report - Rat Genome Database

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Strain: SD-Ldlrem1

Symbol: SD-Ldlrem1
Strain: SD-Ldlrem1
RGD ID: 12910101
Citation ID: RRID:RGD_12910101
Ontology ID: RS:0004461
Alleles: Ldlrem1
Previously known as: SD-Ldlrem1
Type: mutant
Source: Not Available
Origin: This model possesses a 19-bp deletion in the seventh exon of the ldlr gene by ZFN method.
Genetic Status: Homozygous
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2820,270,020 - 20,292,981RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0822,750,425 - 22,773,305RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0822,804,325 - 22,827,199RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4820,824,040 - 20,846,920RGD_MAPPER_PIPELINERGSC3.4

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype


References - curated
# Reference Title Reference Citation
1. A lipidomics study reveals hepatic lipid signatures associating with deficiency of the LDL receptor in a rat model. Wang HY, etal., Biol Open. 2016 Jul 15;5(7):979-86. doi: 10.1242/bio.019802.


Rat Variants
Name Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type
Ldlrem1-var1 chr8 20283596 20283614 TGGTGGACGGCCACCAGTG - deletion
Ldlrem1-var1 chr8 22763920 22763938 TGGTGGACGGCCACCAGTG - deletion

Additional Information