Strain Report - Rat Genome Database

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Strain: SS.BN-(D13Hmgc37-D13Got22)/Mcwi

Symbol: SS.BN-(D13Hmgc37-D13Got22)/Mcwi
Strain: SS.BN-(D13Hmgc37-D13Got22)
Substrain: Mcwi
RGD ID: 12798529
Citation ID: RRID:RGD_12798529
Ontology ID: RS:0004387
Previously known as: Line 5-1; SS.BN-(D13Hmgc37-D13Got22)/Mcwi
Type: congenic
Source: Medical College of Wisconsin, Milwaukee, Wisconsin
Origin: SS/JrHsdMcwi were crossed with SS.BN-(D13Rat111-D13Got22)/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21330,737,550 - 30,737,765RGD_MAPPER_PIPELINEmRatBN7.2
mRatBN7.2593,541,170 - 93,542,503RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01335,643,050 - 49,720,682RGD_MAPPER_PIPELINERnor6.0
Rnor_6.0596,601,805 - 96,603,137RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01340,757,538 - 54,791,605RGD_MAPPER_PIPELINERnor5.0
Rnor_5.05100,631,702 - 100,633,034RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41332,396,527 - 45,828,716RGD_MAPPER_PIPELINERGSC3.4
RGSC_v3.4597,701,780 - 97,703,112RGD_MAPPER_PIPELINERGSC3.4





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Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
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References

References - curated
# Reference Title Reference Citation
1. Narrowing a region on rat chromosome 13 that protects against hypertension in Dahl SS-13BN congenic strains. Moreno C, etal., Am J Physiol Heart Circ Physiol. 2011 Apr;300(4):H1530-5. doi: 10.1152/ajpheart.01026.2010. Epub 2011 Jan 21.

Region

Position Markers

Flank 1 / 1 (D13Hmgc37)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21330,737,550 - 30,737,765 (+)MAPPER
Rnor_6.01335,643,050 - 35,643,266NCBI
Rnor_5.01340,757,538 - 40,757,754UniSTS
RGSC_v3.41332,396,527 - 32,396,743UniSTS
Celera1330,632,228 - 30,632,444UniSTS
Cytogenetic Map13q11UniSTS

Flank 2 / 1 (D13Got22)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2593,541,170 - 93,542,503 (+)MAPPER
Rnor_6.01349,720,575 - 49,720,682NCBI
Rnor_6.0596,601,805 - 96,603,137NCBI
Rnor_5.05100,631,702 - 100,633,034UniSTS
Rnor_5.01354,791,498 - 54,791,605UniSTS
RGSC_v3.4597,701,780 - 97,703,112UniSTS
RGSC_v3.41345,828,608 - 45,828,716RGD
RGSC_v3.41345,828,609 - 45,828,716UniSTS
RGSC_v3.11345,842,652 - 45,842,759RGD
Celera1344,707,006 - 44,707,111UniSTS
Celera592,175,218 - 92,176,550UniSTS
RH 3.4 Map13114.1RGD
RH 3.4 Map13114.1UniSTS
RH 2.0 Map13398.3RGD
Cytogenetic Map13q13UniSTS

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-03-24 SS.BN-(D13Hmgc37-D13Got22)/Mcwi    SS.BN-(D13Hmgc37-D13Rat22)/Mcwi    Symbol updated 68687 APPROVED
2017-03-24 SS.BN-(D13Hmgc37-D13Got22)/Mcwi    SS.BN-(D13Hmgc37-D13Rat22)/Mcwi    Symbol updated 68687 APPROVED