Strain Report - Rat Genome Database

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Strain: SS.BN-(D13Hmgc1041-D13Hmgc885)/Mcwi

Symbol: SS.BN-(D13Hmgc1041-D13Hmgc885)/Mcwi
Strain: SS.BN-(D13Hmgc1041-D13Hmgc885)
Substrain: Mcwi
RGD ID: 12792217
Citation ID: RRID:RGD_12792217
Ontology ID: RS:0004374
Also Known As: SS.BN-(D13Hmgc 1041-D13Hmgc 885); 26-S; SS.BN-(D13Hmgc 1041-D13Hmgc 885)/Mcwi; SS.BN-(D13Hmgc1041-D13Hmgc885)/Mcwi
Type: congenic
Available Source: Not Available
Origination: Medical College of Wisconsin, Milwaukee, Wisconsin
Description: SS/JrHsdMcwi were crossed with SS.BN-(D13Got45-D13Hmgc664)/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21372,402,940 - 72,403,109RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01377,913,594 - 77,913,762RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01381,886,999 - 81,887,143RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41374,586,260 - 74,586,404RGD_MAPPER_PIPELINERGSC3.4





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Mammalian Phenotype

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References

References - curated
# Reference Title Reference Citation
1. Pappa2 is linked to salt-sensitive hypertension in Dahl S rats. Cowley AW Jr, etal., Physiol Genomics. 2016 Jan;48(1):62-72. doi: 10.1152/physiolgenomics.00097.2015. Epub 2015 Nov 3.

Region

Position Markers

Flank 1 / 1 (D13Hmgc1041)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01381,886,999 - 81,887,143RGD
RGSC_v3.41374,586,260 - 74,586,404RGD

Flank 2 / 1 (D13Hmgc885)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21372,402,940 - 72,403,109 (+)MAPPER
Rnor_6.01377,913,594 - 77,913,762NCBI
Cytogenetic Map13 RGD

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-03-14 SS.BN-(D13Hmgc1041-D13Hmgc885)/Mcwi    SS.BN-(D13Hmgc 1041-D13Hmgc 885)/Mcwi    Symbol updated 68687 APPROVED
2018-03-14 SS.BN-(D13Hmgc1041-D13Hmgc885)/Mcwi    SS.BN-(D13Hmgc 1041-D13Hmgc 885)/Mcwi    Symbol updated 68687 APPROVED