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Strain: SS.SHR-(D9Mco115-D9Mco124)/Bj

Symbol: SS.SHR-(D9Mco115-D9Mco124)/Bj
Strain: SS.SHR-(D9Mco115-D9Mco124)
Substrain: Bj
RGD ID: 11354930
Citation ID: RRID:RGD_11354930
Ontology ID: RS:0004205
Previously known as: S.SHR(9)strain 6; S.SHR(9)X10AX6X4; SS.SHR-(D9Mco115-D9Mco124)/Bj
Type: congenic
Source: University of Toledo College of Medicine and Life Sciences
Origin: This is a congenic substrain developed by crossing SS.SHR-(D9Rat7-D9Rat84)/Mco to SS/Jr and the F1 were intercrossed to produce an F2 population,which was genotyped using microsatellite markers. The selected recombinant rats were crossed to SS/Jr again to duplicate the recombinant region.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2989,541,728 - 91,114,199RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0996,024,146 - 97,679,852RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0995,727,999 - 97,361,568RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4989,708,990 - 89,709,209RGD_MAPPER_PIPELINERGSC3.4





Phenotype Values via Phenominer Click to see Annotation Detail View

Related Phenotype Data for Term "SS.SHR-(D9Mco115-D9Mco124)/Bj" (RS:0004205)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References

References - curated
# Reference Title Reference Citation
1. High-resolution mapping of a novel rat blood pressure locus on chromosome 9 to a region containing the Spp2 gene and colocalization of a QTL for bone mass. Nie Y, etal., Physiol Genomics. 2016 Jun;48(6):409-19. doi: 10.1152/physiolgenomics.00004.2016. Epub 2016 Apr 25.

Region

Position Markers

Flank 1 / 1 (D9Mco115)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2989,541,728 - 89,541,928 (+)MAPPER
Rnor_6.0996,024,146 - 96,024,345RGD
Rnor_5.0995,727,999 - 95,728,198RGD

Flank 2 / 1 (D9Mco124)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2991,113,977 - 91,114,199 (+)MAPPER
Rnor_6.0997,679,633 - 97,679,852RGD
Rnor_5.0997,361,349 - 97,361,568RGD
RGSC_v3.4989,708,990 - 89,709,209RGD

Additional Information