Strain Report - Rat Genome Database

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Strain: WKY.F344-(D17Got91-D17Rat51)/Tja

Symbol: WKY.F344-(D17Got91-D17Rat51)/Tja
Strain: WKY.F344-(D17Got91-D17Rat51)
Substrain: Tja
RGD ID: 10401835
Citation ID: RRID:RGD_10401835
Ontology ID: RS:0004044
Previously known as: WKY.F344-(D17Got91-D17Rat51)/Tja; R47A
Type: congenic
Source: MRC Clinical Centre, London, UK
Origin: A congenic strain made by introducing a 15 Mbp segment of chromosome 17 from F344/NHsd into WKY/Cruk, this region has the distal end of Cm15 QTL
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21771,003,329 - 85,119,583RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01774,852,634 - 90,012,722RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01776,512,697 - 91,678,127RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41782,277,434 - 96,587,905RGD_MAPPER_PIPELINERGSC3.4

Experimental Data Annotations    Click to see Annotation Detail View

Rat Strain
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
WKY.F344-(D17Got91-D17Rat51)/Tja  IEA 7241799 RGD 

Vertebrate Trait
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
heart right ventricle mass  EXP 69699 RGD 

Disease Annotations     Click to see Annotation Detail View


References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Right ventricular hypertrophy secondary to pulmonary hypertension is linked to rat chromosome 17: evaluation of cardiac ryanodine Ryr2 receptor as a candidate. Zhao L, etal., Circulation 2001 Jan 23;103(3):442-7.
3. The zinc transporter ZIP12 regulates the pulmonary vascular response to chronic hypoxia. Zhao L, etal., Nature. 2015 Aug 20;524(7565):356-60. doi: 10.1038/nature14620. Epub 2015 Aug 10.


Position Markers

Flank 1 / 1 (D17Got91)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21771,003,329 - 71,003,506 (+)MAPPER
Rnor_6.01774,852,634 - 74,852,810NCBI
Rnor_5.01776,512,697 - 76,512,873UniSTS
RGSC_v3.41782,277,434 - 82,277,611RGD
RGSC_v3.41782,277,435 - 82,277,611UniSTS
RGSC_v3.11782,288,268 - 82,288,444RGD
Celera1770,465,173 - 70,465,349UniSTS
RH 3.4 Map17704.6UniSTS
RH 3.4 Map17704.6RGD
RH 2.0 Map17608.8RGD

Flank 2 / 1 (D17Rat51)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21785,119,450 - 85,119,583 (-)MAPPER
Rnor_6.01790,012,592 - 90,012,722NCBI
Rnor_5.01791,677,997 - 91,678,127UniSTS
RGSC_v3.41796,587,775 - 96,587,905UniSTS
RGSC_v3.41796,587,774 - 96,587,905RGD
RGSC_v3.11796,598,608 - 96,598,738RGD
Celera1783,775,845 - 83,775,971UniSTS
RH 3.4 Map17848.7RGD
RH 3.4 Map17848.7UniSTS
RH 2.0 Map17730.2RGD
SHRSP x BN Map1747.5399RGD
FHH x ACI Map1768.73RGD
Cytogenetic Map17q12.3UniSTS
Strain QTL Data
Symbol Name Trait
Cm15 Cardiac mass QTL 15 heart right ventricle mass   (VT:0007033)    

Additional Information

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-10-08 WKY.F344-(D17Got91-D17Rat51)/Tja    WKY.F344-(D17Got91-D17Rat51)/Tja    Name updated 68913 APPROVED
2015-10-08 WKY.F344-(D17Got91-D17Rat51)/Tja    WKY.F344-(D17Got91-D17Rat51)/Tja    Name updated 68913 APPROVED