rs74054849 Rat Genome Database

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Variant: rs74054849 -  Homo sapiens

RGD ID: 406226300
RS ID: rs74054849
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: SLC25A34-AS1  TMEM82  
Reference Nucleotide: G
Variant Nucleotide: ?
Position
Assembly Chr Position
GRCh38 1 15,743,433
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Pancreatitis  (IAGP)
GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS795749_H GCST004860 Alcoholic chronic pancreatitis 1,959 European ancestry cases, 1,488 European ancestry alcohol abuse controls, 4,552 European ancestry controls ? NR 0.000006 5.222 rs74054849 1.3950893 alcoholic pancreatitis (EFO:1002013)
 PMID:28754779

Variant Details
Variant Transcripts
Gene Symbol:TMEM82
Accession:NM_001013641
Location:INTRON

Gene Symbol:SLC25A34-AS1
Accession:NR_149050
Location:INTRON;NON-CODING

Variant Samples

Additional Information

Database Acc Id Source(s)
GWAS Catalog GCST004860 GWAS Catalog