rs10843330 Rat Genome Database

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Variant: rs10843330 -  Homo sapiens

RGD ID: 406242069
RS ID: rs10843330
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: FAR2  
Reference Nucleotide: C
Variant Nucleotide: ?
Position
Assembly Chr Position
GRCh38 12 29,152,866
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
rs10843330Humanblood glucose level  IAGP 405850206Based on the EFO term IDGWAS_CATALOGPMID:23823483

Vertebrate Trait
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
rs10843330Humanfructose absorption trait  IAGP 405850206Based on the EFO term IDGWAS_CATALOGPMID:23823483

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
rs10843330Humanfructose measurement  IAGP 405850206 GWAS_CATALOGPMID:23823483
rs10843330Humangalactose measurement  IAGP 405850206 GWAS_CATALOGPMID:23823483
rs10843330Humanglucose measurement  IAGP 405850206 GWAS_CATALOGPMID:23823483
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Vertebrate Trait

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS796386_H GCST009391 Metabolite levels 2,076 European ancestry individuals ? NR 9E-7 6.046 rs10843330 0.29541168 fructose measurement (EFO:0010477)
glucose measurement (EFO:0004468)
galactose measurement (EFO:0010481)
 PMID:23823483

Variant Details
Variant Transcripts
Gene Symbol:FAR2
Accession:NM_001271783
Location:5UTRS;INTRON

Gene Symbol:FAR2
Accession:XM_011520748
Location:INTRON

Gene Symbol:FAR2
Accession:XM_011520747
Location:INTRON

Gene Symbol:FAR2
Accession:NM_018099
Location:INTRON

Gene Symbol:FAR2
Accession:NM_001271784
Location:INTRON

Variant Samples

Additional Information

Database Acc Id Source(s)
GWAS Catalog GCST009391 GWAS Catalog