Scort6 QTL Report (Rattus norvegicus) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

QTL: Scort6 (Serum corticosterone level QTL 6) Rattus norvegicus

Symbol: Scort6
Name: Serum corticosterone level QTL 6
RGD ID: 9590144
Also known as: plasma cort at basal level; plasma corticosterone at basal level
Trait: blood corticosterone amount   (VT:0005345)    
Measurement Type: plasma corticosterone level   (CMO:0001173)    
LOD Score: 17.54
P Value: 0.001
Variance: 13.7
Position No map positions available.
Cross Type: intercross
Strains Crossed: F344/IcoCrlf LOU/NimrOlaHsd 



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
1. Marissal-Arvy N, etal., Horm Metab Res. 2014 Jul 8.

Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D8Rat159)
Rat AssemblyChrPosition (strand)Source
RH 3.4 Map8458.3RGD
RH 3.4 Map8458.3UniSTS
RH 2.0 Map8373.8RGD
SHRSP x BN Map835.78RGD


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general confidence interval 44.4-69.2 Mb 8694157
qtl_general number of animals used: 93 F2 males and 94 F2 females 8694157
qtl_general measurement method: blood samples were taken in the morning and collected on EDTA, centrifuged at 4000g for 10 min to extract the plasma, plasma corticosterone was measured with an in-house RIA kit using an anti-Cort antibody 8694157
qtl_general software package used: MultiQTL software 8694157
qtl_general an additional peak at D8Rat29 with confidence interval 63.9-89.2 Mb was observed 8694157