Slep12 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Slep12 (Serum leptin concentration QTL 12) Rattus norvegicus

Symbol: Slep12
Name: Serum leptin concentration QTL 12
RGD ID: 9589100
Trait: blood leptin amount   (VT:0005667)    
Measurement Type: plasma leptin level   (CMO:0000781)    
LOD Score: 5.2
P Value: 0.001
Variance: 8.0
Position No map positions available.
Cross Type: Not Available
Strains Crossed: F344/IcoCrlf LOU/NimrOlaHsd 



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Quantitative Trait Loci Influencing Abdominal Fat Deposition and Functional Variability of the HPA Axis in the Rat. Marissal-Arvy N, etal., Horm Metab Res. 2014 Jul 8.

Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D5Mgh2)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01661,815,479 - 61,816,040UniSTS
Rnor_5.0521,842,228 - 21,842,328UniSTS
RGSC_v3.4517,517,135 - 17,517,235UniSTS
RGSC_v3.41662,207,989 - 62,208,550UniSTS
RGSC_v3.4517,517,134 - 17,517,235RGD
RGSC_v3.1517,517,134 - 17,517,235RGD
Celera516,536,980 - 16,537,080UniSTS
Celera1656,475,146 - 56,475,707UniSTS
RH 3.4 Map5100.9RGD
RH 3.4 Map5100.9UniSTS
RH 2.0 Map5107.5RGD
Cytogenetic Map16q12.3UniSTS


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general confidence interval 17.5-173.1 Mb 8694157
qtl_general number of animals used: 93 F2 males and 94 F2 females 8694157
qtl_general measurement method: at the end of the HPA axis function experiment, animals were fasted overnight, blood samples collected on EDTA, centrifuged at 4000g, plasma extracted and plasma leptin level measured in triplicate with RIA kit (Linco Research, St Charles, MO, USA) 8694157
qtl_general software package used: MultiQTL software 8694157