Scfw4 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Scfw4 (Subcutaneous fat weight QTL 4) Rattus norvegicus

Symbol: Scfw4
Name: Subcutaneous fat weight QTL 4
RGD ID: 9589051
Also known as: percentage of subcutaneous fat
Trait: subcutaneous adipose mass   (VT:1000472)    
Measurement Type: abdominal subcutaneous fat pad weight   (CMO:0002069)    
LOD Score: 3.37
P Value: 0.001
Variance: 3.9
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.0853,845,590 - 98,845,590RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4852,269,638 - 97,269,638RGD_MAPPER_PIPELINERGSC3.4
Cross Type: software package used: MultiQTL software
Strains Crossed: F344/IcoCrlf LOU/NimrOlaHsd 



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
1. Marissal-Arvy N, etal., Horm Metab Res. 2014 Jul 8.

Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D8Rat29)
Rat AssemblyChrPosition (strand)Source
Rnor_5.0876,345,502 - 76,345,678NCBI
RGSC_v3.4874,769,551 - 74,769,726RGD
RGSC_v3.1874,788,605 - 74,788,780RGD
RH 2.0 Map8679.5RGD
SHRSP x BN Map844.83RGD
FHH x ACI Map851.31RGD


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general confidence interval 23.4-122.7 Mb 8694157
qtl_general number of animals used: 93 F2 males and 94 F2 females 8694157
qtl_general measurement method: at the end of the HPA axis function experiment, body weight was taken; subcutaneous fat was removed and weighed and percentage was calculated 8694157
qtl_general software package used: MultiQTL software 8694157