Memor19 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Memor19 (Memory QTL 19) Rattus norvegicus

Symbol: Memor19
Name: Memory QTL 19
RGD ID: 7771605
Previously known as: BP-f4/NAV-8 QTLs
Trait: exploratory behavior trait   (VT:0010471)    
Measurement Type: measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus   (CMO:0000957)    
LOD Score: Not Available
P Value: 1.0E-5
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.02183,864,092 - 187,196,901RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02203,270,720 - 206,602,006RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.42176,635,705 - 179,892,073RGD_MAPPER_PIPELINERGSC3.4
Cross Type: Not Available
Strains Crossed: SS.SR-(D2Rat352-rs63922710)/Opaz 



Candidate Gene Status
Dear is a candidate Gene for Memor19

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
1. Herrera VL, etal., PLoS One. 2013 Jul 4;8(7):e67673. doi: 10.1371/journal.pone.0067673. Print 2013.
Related QTLs

Related QTL Description Reference
Bp371 maps to same region RGD:7495755


Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Flank 1: (rs106870553)
Rat AssemblyChrPosition (strand)Source
Rnor_6.02183,864,092 - 183,864,092RGD
Rnor_5.02203,270,720 - 203,270,720RGD
RGSC_v3.42176,635,705 - 176,635,705RGD
Celera2164,196,006 - 164,196,006RGD
Flank 2: (rs64088007)
Rat AssemblyChrPosition (strand)Source
Rnor_6.02187,196,901 - 187,196,901RGD
Rnor_5.02206,602,006 - 206,602,006RGD
RGSC_v3.42179,892,073 - 179,892,073RGD
Celera2167,240,071 - 167,240,071RGD


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general number of animals used: 16 gender: male 7495755
qtl_general measurement method: animals were phenotyped using the Morris water maze (MWM), test of spatial navigation, distance was measured and used to evaluate performance, 12 trails/day for 2 days with a 60 sec maximum swim time 7495755
qtl_general software package used: ANOVA followed by Holm-Sidak test 7495755
qtl_general Co-localizes with Bp371 (BP-f4) QTL 7495755
qtl_general spans between 176.6-179.9 Mbp 7495755
qtl_general incorporates 36 annotated genes 7495755