Foco31 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Foco31 (Food consumption QTL 31) Rattus norvegicus

Symbol: Foco31
Name: Food consumption QTL 31
RGD ID: 7411666
Trait: eating behavior trait   (VT:0001431)    
Measurement Type: feed conversion ratio   (CMO:0001312)    
LOD Score: 11.4
P Value: 0.001
Variance: 9.9
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.01716,409,641 - 61,409,641RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41719,150,649 - 64,150,649RGD_MAPPER_PIPELINERGSC3.4
Cross Type: intercross
Strains Crossed: F344/IcoCrlf LOU/NimrOlaHsd 



Disease Annotations     Click to see Annotation Detail View
Body Weight  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
1. Marissal-Arvy N, etal., Obesity (Silver Spring). 2013 Apr 17. doi: 10.1002/oby.20485.

Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D17Rat118)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01738,909,435 - 38,909,847NCBI
RGSC_v3.41741,650,444 - 41,650,855RGD
RGSC_v3.11741,653,285 - 41,653,696RGD
RH 3.4 Map17391.8UniSTS
RH 3.4 Map17391.8RGD
RH 2.0 Map17285.9RGD
SHRSP x BN Map1728.1999RGD


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross 7401255
qtl_general measurement method: At 16 weeks of age animals were individually housed and given self-selection diet (protein, carbohydrate and fat diet in three separate cups); percentage of lipid intake calculated as the relative amount of calories provided by fat against total calories consumed 7401255
qtl_general carbohydrate and fat intake are highly correlated 7401255
qtl_general software package used: multiple interval mapping (MIM); MultiQTL software (version 2.6); ANOVA 7401255
qtl_general number of animals used: 94 F2 females 7401255
qtl_map spans from 46.7-58.6 Mb; peak at 52.7 Mb 7401255