Anxrr44 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Anxrr44 (Anxiety related response QTL 44) Rattus norvegicus

Symbol: Anxrr44
Name: Anxiety related response QTL 44
RGD ID: 6478757
Also known as: time in dark LDB
Trait: locomotor behavior trait   (VT:0001392)    
Measurement Type: amount of experiment time spent in a discrete space in an experimental apparatus   (CMO:0000958)    
LOD Score: LRS: 9.5
P Value: 0.01087
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.04155,386,197 - 184,226,339RGD_MAPPER_PIPELINERnor6.0
Cross Type: intercross
Strains Crossed: SHR/NCrlAnra LEW/HsdUnibAnra 



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Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Vertebrate Trait

Rat Strain

References

References - curated
1. Izidio GS, etal., Mamm Genome. 2011 Jun;22(5-6):329-40. Epub 2011 Apr 24.

Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D4Rat206)
Rat AssemblyChrPosition (strand)Source
Rnor_6.04177,886,107 - 177,886,288NCBI
RH 3.4 Map41056.9RGD
RH 3.4 Map41056.9UniSTS
SHRSP x BN Map496.5499UniSTS
SHRSP x BN Map496.5499RGD
FHH x ACI Map4112.37RGD


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross 6218999
qtl_general measurement method:rat was placed in the center of the light compartment that had white and red bulbs 30 cm above the floor and time spent with all four paws in the dark compartment was scored 6218999
qtl_general number of animals used: 96 female F2 rats 6218999
qtl_general inducing agent:subcutaneous injection of estradiol benzoate (10ug/0.1ml) and progesterone (5mg/kg) in a injection volume of 1mg/kg 6218999
qtl_general software used:Genotype=QTX; behavioral variables=two-way ANOVA 6218999
qtl_general spans 110 cM 6218999
qtl_statistics LRS: 9.5 6218999