Anxrr39 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Anxrr39 (Anxiety related response QTL 39) Rattus norvegicus

Symbol: Anxrr39
Name: Anxiety related response QTL 39
RGD ID: 6478740
Also known as: Central locomotion OF
Trait: locomotor behavior trait   (VT:0001392)    
Measurement Type: number of entries into a discrete space in an experimental apparatus   (CMO:0000960)    
LOD Score: LRS: 6.0
P Value: 0.07528
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.04168,999,347 - 213,999,347RGDRnor5.0
RGSC_v3.44106,808,891 - 151,808,891RGDRGSC3.4
Cross Type: intercross
Strains Crossed: SHR/NCrlAnra LEW/HsdUnibAnra 



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
1. Izidio GS, etal., Mamm Genome. 2011 Jun;22(5-6):329-40. Epub 2011 Apr 24.

Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D4Mgh27)
Rat AssemblyChrPosition (strand)Source
Rnor_5.04191,499,221 - 191,499,474NCBI
RGSC_v3.44129,308,765 - 129,309,017RGD
RGSC_v3.14129,553,606 - 129,553,858RGD
RH 3.4 Map4770.5UniSTS
RH 3.4 Map4770.5RGD
RH 2.0 Map4858.9RGD
Cytogenetic Map4 RGD


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross 6218999
qtl_general measurement method: rat was placed in the center of the open field and movement scored for 5 min that is number of central squares crossed with all 4 paws 6218999
qtl_general number of animals used: 96 female F2 rats 6218999
qtl_general inducing agent:subcutaneous injection of estradiol benzoate (10ug/0.1ml) and progesterone (5mg/kg) in a injection volume of 1mg/kg 6218999
qtl_general software used:Genotype=QTX; behavioral variables=two-way ANOVA 6218999
qtl_general spans 71 cM 6218999
qtl_statistics LRS: 6.0 6218999