GWAS1564819_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL: GWAS1564819_H (renin measurement QTL GWAS1564819 (human)) Homo sapiens

Symbol: GWAS1564819_H
Name: renin measurement QTL GWAS1564819 (human)
RGD ID: 597468745
Trait: adrenal gland renin amount   (VT:0010952)    
blood renin amount   (VT:0003349)    
kidney renin amount   (VT:0010559)    
renin activity   (VT:0005581)    
LOD Score: Not Available
P Value: 6.0E-18
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381204,188,040 - 204,188,041RGD_MAPPER_PIPELINEGRCh38
GRCh371204,157,168 - 204,157,169RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Vertebrate Trait

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS1564819_HHumanrenin measurement  IAGPrs4951315405850206 GWAS_CATALOGPMID:33067605
Experimental Data Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs4951315)
Human AssemblyChrPosition (strand)Source
GRCh381204,188,040 - 204,188,041RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
597468745GWAS1564819_Hrenin measurement QTL GWAS1564819 (human)6e-18renin activity (VT:0005581)1204188040204188041Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS1564819_H GCST90012038 Renin levels 21,758 European ancestry individuals A 0.3 6E-18 17.222 rs4951315 0.0878 renin measurement (EFO:0010616)
PMID:33067605
Database Acc Id Source(s)
GWAS Catalog GCST90012038 GWAS Catalog

RGD Curation Notes
Note Type Note Reference