GWAS1555723_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL: GWAS1555723_H (renin measurement QTL GWAS1555723 (human)) Homo sapiens

Symbol: GWAS1555723_H
Name: renin measurement QTL GWAS1555723 (human)
RGD ID: 597459649
Trait: adrenal gland renin amount   (VT:0010952)    
blood renin amount   (VT:0003349)    
kidney renin amount   (VT:0010559)    
renin activity   (VT:0005581)    
LOD Score: Not Available
P Value: 2.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38879,905,325 - 79,905,326RGD_MAPPER_PIPELINEGRCh38
GRCh37880,817,560 - 80,817,561RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Vertebrate Trait

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS1555723_HHumanrenin measurement  IAGPrs13270296405850206 GWAS_CATALOGPMID:38565889
Experimental Data Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
16570946LOC124901966uncharacterized LOC12490196687989181579930908Human

Position Markers

Peak: (rs13270296)
Human AssemblyChrPosition (strand)Source
GRCh38879,905,325 - 79,905,326RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
597459649GWAS1555723_Hrenin measurement QTL GWAS1555723 (human)2e-08renin activity (VT:0005581)87990532579905326Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS1555723_H GCST90277561 REN protein levels 497 European ancestry individuals T NR 2E-8 7.699 rs13270296 0.3362 renin measurement (EFO:0010616)
PMID:38565889
Database Acc Id Source(s)
GWAS Catalog GCST90277561 GWAS Catalog

RGD Curation Notes
Note Type Note Reference