GWAS1502751_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL: GWAS1502751_H (renin measurement QTL GWAS1502751 (human)) Homo sapiens

Symbol: GWAS1502751_H
Name: renin measurement QTL GWAS1502751 (human)
RGD ID: 597406677
Trait: adrenal gland renin amount   (VT:0010952)    
blood renin amount   (VT:0003349)    
kidney renin amount   (VT:0010559)    
renin activity   (VT:0005581)    
LOD Score: Not Available
P Value: 2.0E-20
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381204,179,521 - 204,179,522RGD_MAPPER_PIPELINEGRCh38
GRCh371204,148,649 - 204,148,650RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Vertebrate Trait

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS1502751_HHumanrenin measurement  IAGPrs193280350405850206 GWAS_CATALOGPMID:36168886
Experimental Data Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs193280350)
Human AssemblyChrPosition (strand)Source
GRCh381204,179,521 - 204,179,522RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
597468744GWAS1564818_Hrenin measurement QTL GWAS1564818 (human)8e-108renin activity (VT:0005581)1204179521204179522Human
597440503GWAS1536577_Hrenin measurement QTL GWAS1536577 (human)1e-15renin activity (VT:0005581)1204179521204179522Human
597406677GWAS1502751_Hrenin measurement QTL GWAS1502751 (human)2e-20renin activity (VT:0005581)1204179521204179522Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS1502751_H GCST90161760 Renin levels 2,935 Qatari ancestry individuals A 0.0131175 2E-20 19.699 rs193280350 1.10236 renin measurement (EFO:0010616)
PMID:36168886
GWAS1536577_H GCST90242627 Renin levels (REN.3396.54.2) 3,301 European ancestry individuals A 0.008 1E-15 15 rs193280350 1.2 renin measurement (EFO:0010616)
PMID:29875488
GWAS1564818_H GCST90012038 Renin levels 21,758 European ancestry individuals A 0.012 8E-108 107.097 rs193280350 0.9625 renin measurement (EFO:0010616)
PMID:33067605
Database Acc Id Source(s)
GWAS Catalog GCST90161760 GWAS Catalog

RGD Curation Notes
Note Type Note Reference