GWAS1391764_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL: GWAS1391764_H (renin measurement, hypertension QTL GWAS1391764 (human)) Homo sapiens

Symbol: GWAS1391764_H
Name: renin measurement, hypertension QTL GWAS1391764 (human)
RGD ID: 597295690
Trait: adrenal gland renin amount   (VT:0010952)    
blood renin amount   (VT:0003349)    
kidney renin amount   (VT:0010559)    
renin activity   (VT:0005581)    
LOD Score: Not Available
P Value: 4.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3844,950,685 - 4,950,686RGD_MAPPER_PIPELINEGRCh38
GRCh3744,952,412 - 4,952,413RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
hypertension  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Hypertension  (IAGP)
Experimental Data Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
38661950LOC101928306uncharacterized LOC101928306449208084988671Human

Position Markers

Peak: (rs11726091)
Human AssemblyChrPosition (strand)Source
GRCh3844,950,685 - 4,950,686RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
597295690GWAS1391764_Hrenin measurement, hypertension QTL GWAS1391764 (human)0.000004renin activity (VT:0005581)449506854950686Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS1391764_H GCST90128470 New onset hypertension (high renin group) 410 Korean ancestry cases, 1,135 Korean ancestry controls ? NR 0.000004 5.398 rs11726091 1.48 renin measurement (EFO:0010616)
hypertension (EFO:0000537)
PMID:35448080
Database Acc Id Source(s)
GWAS Catalog GCST90128470 GWAS Catalog

RGD Curation Notes
Note Type Note Reference