GWAS1391763_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL: GWAS1391763_H (renin measurement, hypertension QTL GWAS1391763 (human)) Homo sapiens

Symbol: GWAS1391763_H
Name: renin measurement, hypertension QTL GWAS1391763 (human)
RGD ID: 597295689
Trait: adrenal gland renin amount   (VT:0010952)    
blood renin amount   (VT:0003349)    
kidney renin amount   (VT:0010559)    
renin activity   (VT:0005581)    
LOD Score: Not Available
P Value: 3.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh384166,342,985 - 166,342,986RGD_MAPPER_PIPELINEGRCh38
GRCh374167,264,137 - 167,264,138RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
hypertension  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Hypertension  (IAGP)
Experimental Data Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs145286444)
Human AssemblyChrPosition (strand)Source
GRCh384166,342,985 - 166,342,986RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
597295689GWAS1391763_Hrenin measurement, hypertension QTL GWAS1391763 (human)0.000003renin activity (VT:0005581)4166342985166342986Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS1391763_H GCST90128469 New onset hypertension (low renin group) 1,294 Korean ancestry cases, 2,372 Korean ancestry controls ? NR 0.000003 5.523 rs145286444 1.54 renin measurement (EFO:0010616)
hypertension (EFO:0000537)
PMID:35448080
Database Acc Id Source(s)
GWAS Catalog GCST90128469 GWAS Catalog

RGD Curation Notes
Note Type Note Reference