GWAS1277701_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL: GWAS1277701_H (renin measurement QTL GWAS1277701 (human)) Homo sapiens

Symbol: GWAS1277701_H
Name: renin measurement QTL GWAS1277701 (human)
RGD ID: 597181627
Trait: adrenal gland renin amount   (VT:0010952)    
blood renin amount   (VT:0003349)    
kidney renin amount   (VT:0010559)    
renin activity   (VT:0005581)    
LOD Score: Not Available
P Value: 4.0E-34
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381204,237,969 - 204,237,970RGD_MAPPER_PIPELINEGRCh38
GRCh371204,207,097 - 204,207,098RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Vertebrate Trait

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS1277701_HHumanrenin measurement  IAGPrs141995914405850206 GWAS_CATALOGPMID:34648354
Experimental Data Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1353676PLEKHA6pleckstrin homology domain containing A61204218853204378168Human

Position Markers

Peak: (rs141995914)
Human AssemblyChrPosition (strand)Source
GRCh381204,237,969 - 204,237,970RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
597181627GWAS1277701_Hrenin measurement QTL GWAS1277701 (human)4e-34renin activity (VT:0005581)1204237969204237970Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS1277701_H GCST90249281 Renin levels 10,708 European ancestry individuals T 0.99 4E-34 33.398 rs141995914 0.803 renin measurement (EFO:0010616)
PMID:34648354
Database Acc Id Source(s)
GWAS Catalog GCST90249281 GWAS Catalog

RGD Curation Notes
Note Type Note Reference