Cstrr2 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Cstrr2 (Cold stress response QTL 2) Rattus norvegicus

Symbol: Cstrr2
Name: Cold stress response QTL 2
RGD ID: 4889419
Trait: urine catecholamine amount   (VT:0010502)    
Measurement Type: absolute change in urine norepinephrine level   (CMO:0001634)    
LOD Score: Not Available
P Value: 0.05
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81165,278,545 - 168,003,898RGD_MAPPER_PIPELINE
mRatBN7.21155,866,514 - 158,592,016RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01166,577,232 - 169,318,847RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01172,767,534 - 175,466,596RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41158,964,262 - 161,961,786RGD_MAPPER_PIPELINERGSC3.4
Cross Type: Not Available
Strains Crossed: SHRSP.WKY-(D1Smu13-D1Wox33)/Izm 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. A 1.8-Mbp fragment on chromosome 1 affects sympathetic response to stress: evaluation in reciprocal congenic strains between stroke-prone spontaneously hypertensive rat and Wistar-Kyoto rat. Xiao B, etal., J Hypertens. 2010 Nov 8.
Related QTLs

Related QTL Description Reference
Stresp24 maps to same region RGD:4889147


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
620965Pde2aphosphodiesterase 2A1155823590155915434Rat
2325383Mir139microRNA 1391155878828155878895Rat
41080214LOC120099897uncharacterized LOC1200998971155953421155981611Rat
3521Art2bADP-ribosyltransferase 2b1155956601155974252Rat
1598290Ldha-ps3lactate dehydrogenase A, pseudogene 31156017007156018106Rat
621328ClpbClpB family mitochondrial disaggregase1156028740156158183Rat
7606674LOC102547177uncharacterized LOC1025471771156162119156171192Rat
621323Phox2apaired-like homeobox 2a1156178754156183118Rat
68396Inppl1inositol polyphosphate phosphatase-like 11156183043156197500Rat
9227837LOC103691225putative uncharacterized protein1156196466156197649Rat
1308515Folr2folate receptor beta1156200044156218380Rat
7736376Rpl12-ps3ribosomal protein L12, pseudogene 31156208145156208657Rat
71032Folr1folate receptor alpha1156219460156238436Rat
1311634Anapc15anaphase promoting complex subunit 151156238640156266005Rat
1561509Lrtomtleucine rich transmembrane and O-methyltransferase domain containing1156266655156268704Rat
735078Lamtor1late endosomal/lysosomal adaptor, MAPK and MTOR activator 11156272116156277687Rat
1565856Lrrc51leucine rich repeat containing 511156278617156297838Rat
1308777Numa1nuclear mitotic apparatus protein 11156297907156372855Rat
620042Il18bpinterleukin 18 binding protein1156372923156374963Rat
1307857Rnf121ring finger protein 1211156377368156439936Rat
7692537Xndc1Xrcc1 N-terminal domain containing 11156440284156460609Rat
628819Trpc2transient receptor potential cation channel subfamily C member 21156460009156473039Rat
628834Art5ADP-ribosyltransferase 51156473362156483324Rat
1304591Art1ADP-ribosyltransferase 11156478096156487172Rat
620142Chrna10cholinergic receptor nicotinic alpha 10 subunit1156487279156494277Rat
71033Nup98nucleoporin 98 and 96 precursor1156494423156591415Rat
11436026Gpx4-ps1glutathione peroxidase 4, pseudogene 11156569245156570007Rat
619744Pgap2post-GPI attachment to proteins 21156591540156618116Rat
621310Rhogras homolog family member G1156618713156630710Rat
11481264Rps29-ps1ribosomal protein S29, pseudogene 11156638258156638584Rat
1306831Stim1stromal interaction molecule 11156656246156818777Rat
9366670LOC103691224ribosome biogenesis protein NSA2 homolog pseudogene1156758473156773537Rat
1592569Rrm1ribonucleotide reductase catalytic subunit M11156823960156848262Rat
1333505Or55b3olfactory receptor family 55 subfamily B member 31156859322156860519Rat
1333356Or55b4olfactory receptor family 55 subfamily B member 41156866390156867379Rat
1334204Or55b10olfactory receptor family 55 subfamily B member 101156884142156885092Rat
41133992LOC120099898glyceraldehyde-3-phosphate dehydrogenase-like1156884450156934043Rat
1334081Or52b4olfactory receptor family 52 subfamily B member 41156939068156940009Rat
1334129Or52b3-ps1olfactory receptor family 52 subfamily B member 3, pseudogene 11156963553156964495Rat
1305795Trim21tripartite motif-containing 211156964896156987504Rat
1333514Or51r1olfactory receptor family 51 subfamily R member 11156998692156999642Rat
1333531Or52p2olfactory receptor family 52 subfamily P member 21157010581157011528Rat
1333028Or52k2olfactory receptor family 52 subfamily K member 21157026845157027798Rat
1333293Or52k1olfactory receptor family 52 subfamily K member 11157037381157038325Rat
1593913Bcl2l1-ps1Bcl2-like 1, pseudogene 11157042301157044415Rat
1334009Or52m2olfactory receptor family 52 subfamily M member 21157048003157048962Rat
1333547Or52m1olfactory receptor family 52 subfamily M member 11157065217157066170Rat
1593885Or51h1olfactory receptor family 51 subfamily H member 11157090324157091271Rat
1593877Or52i2olfactory receptor family 52 subfamily I member 21157105171157106151Rat
41296074Or52i2l-ps1olfactory receptor family 52 subfamily I member 2 like, pseudogene 11157112092157113068Rat
1593867Trim68tripartite motif containing 681157114044157127494Rat
1592737Or51d1olfactory receptor family 51 subfamily D member 11157134584157135641Rat
1332833Or51e1olfactory receptor family 51 subfamily E member 11157142232157151114Rat
1334421Or51a39olfactory receptor family 51 subfamily A member 391157152386157153348Rat
41091203Or51a25bl1olfactory receptor family 51 subfamily A member 25B like 11157160337157161936Rat
1333377Or51a25bolfactory receptor family 51 subfamily A member 25B1157170104157171066Rat
1333240Or51a25olfactory receptor family 51 subfamily A member 251157179120157180082Rat
40970916LOC120100439small nucleolar RNA SNORA171157186339157186469Rat
628858Olr59olfactory receptor 591157193051157227707Rat
1333708Or51f23b-ps1olfactory receptor family 51 subfamily F member 23B, pseudogene 11157204792157205735Rat
1332953Or51f5olfactory receptor family 51 subfamily F member 51157224045157224989Rat
1333218Or51f23colfactory receptor family 51 subfamily F member 23C1157231467157232417Rat
1333535Olr55-psolfactory receptor pseudogene 551157236148157236449Rat
1333155Or51f23-ps1olfactory receptor family 51 subfamily F member 23, pseudogene 11157243704157244405Rat
1333228Or51f4olfactory receptor family 51 subfamily F member 41157257231157258175Rat
1593886Or51f1olfactory receptor family 51 subfamily F member 11157278651157279610Rat
9149734Or52r7olfactory receptor family 52 subfamily R member 71157284942157285649Rat
1332773Or51f2olfactory receptor family 51 subfamily F member 21157292342157293292Rat
1333662Or52r1olfactory receptor family 52 subfamily R member 11157301200157302174Rat
6485887Hmgb1-ps20high-mobility group box 1, pseudogene 201157313524157314172Rat
1333161Or51s1olfactory receptor family 51 subfamily S member 11157315393157316319Rat
1591447Or51h5olfactory receptor family 51 subfamily H member 51157348962157350022Rat
1591436Or51h1l1olfactory receptor family 51 subfamily H member 1 like 11157358640157363279Rat
1563481Or51t1olfactory receptor, family 51, subfamily T, member 11157370394157371434Rat
1333965Or51a6-ps1olfactory receptor family 51 subfamily A member 6, pseudogene 11157376150157377038Rat
1334397Or51a7olfactory receptor family 51 subfamily A member 71157395779157396717Rat
3207Nras-ps1neuroblastoma RAS viral (v-ras) oncogene homolog , pseudogene 11157404959157406216Rat
1333806Or51a7bolfactory receptor family 51 subfamily A member 7B1157415212157416180Rat
1332641Or51g2olfactory receptor family 51 subfamily G member 21157421637157422575Rat
1334292Or51g1olfactory receptor family 51 subfamily G member 11157438123157439064Rat
1334324Or51a45-ps1olfactory receptor family 51 subfamily A member 45, pseudogene 11157446294157447224Rat
1333720Or51a41olfactory receptor family 51 subfamily A member 411157454391157455398Rat
1333753Or51a5b-ps1olfactory receptor family 51 subfamily A member 5B, pseudogene 11157461693157462619Rat
1332815Or52r1colfactory receptor family 52 subfamily R member 1C1157475119157476063Rat
1332889Or51f1folfactory receptor family 51 subfamily F member 1F1157479786157484201Rat
1333966Or51a5-ps1olfactory receptor family 51 subfamily A member 5, pseudogene 11157495818157496386Rat
1334432Or51f1golfactory receptor family 51 subfamily F member 1G1157502544157503494Rat
1333532Or51l1olfactory receptor family 51 subfamily L member 11157516210157517157Rat
1589774Or51p1olfactory receptor family 51 subfamily P member 11157523148157524089Rat
1334015Or52e2olfactory receptor family 52 subfamily E member 21157561070157562023Rat
1332721Or52j3bolfactory receptor family 52 subfamily J member 3B1157572005157572943Rat
1333176Or52s1bolfactory receptor family 52 subfamily S member 1B1157587391157589170Rat
1333934Or52j3olfactory receptor family 52 subfamily J member 31157605177157606115Rat
1333158Or52s1olfactory receptor family 52 subfamily S member 11157619852157620835Rat
1333207Or52e3olfactory receptor family 52 subfamily E member 31157626717157627652Rat
1333697Or52e51olfactory receptor family 52 subfamily E member 511157656899157657837Rat
1332971Or52e19olfactory receptor family 52 subfamily E member 191157668879157669817Rat
1333956Or52ab2olfactory receptor family 52 subfamily AB member 21157681873157682820Rat
1333865Or52ab2bolfactory receptor family 52 subfamily AB member 2B1157689725157690675Rat
1333469Or52ad1b-ps1olfactory receptor family 52 subfamily AD member 1B, pseudogene 11157702587157703531Rat
1333576Or52ab4olfactory receptor family 52 subfamily AB member 41157725793157726740Rat
1333961Or52ad1olfactory receptor family 52 subfamily AD member 11157733568157734512Rat
1333424Or52s19olfactory receptor family 52 subfamily S member 191157742232157743176Rat
1333794Or52s20olfactory receptor family 52 subfamily S member 201157748451157749422Rat
1333223Or52s6olfactory receptor family 52 subfamily S member 61157756757157757701Rat
1333486Or51l14olfactory receptor family 51 subfamily L member 141157767340157768296Rat
1333983Or52d13olfactory receptor family 52 subfamily D member 131157778486157782381Rat
1334262Or52ae7bolfactory receptor family 52 subfamily AE member 7B1157797762157798709Rat
1333117Or51af1b-ps1olfactory receptor family 51 subfamily AF member 1B, pseudogene 11157804670157805625Rat
1333043Olr100-psolfactory receptor pseudogene 1001157813825157814045Rat
1333874Or52ae10olfactory receptor family 52 subfamily AE member 101157824326157825276Rat
1333432Or51af1c-ps1olfactory receptor family 51 subfamily AF member 1C, pseudogene 11157832733157833688Rat
1333435Or52ae7olfactory receptor family 52 subfamily AE member 71157853355157854305Rat
1333997Or51af1olfactory receptor family 51 subfamily AF member 11157864549157865508Rat
1333791Or51ag1olfactory receptor family 51 subfamily AG member 11157878427157879374Rat
1334302Or51aa2olfactory receptor family 51 subfamily AA member 21157888966157889937Rat
1334037Or51ab3olfactory receptor family 51 subfamily AB member 31157901417157902370Rat
1332894Or51ah3olfactory receptor family 51 subfamily AH member 31157917326157918267Rat
1333707Or51ac3olfactory receptor family 51 subfamily AC member 31157921167157922120Rat
41254060LOC120100375small nucleolar RNA SNORA2/SNORA34 family1157930780157930915Rat
1333316Or52z12olfactory receptor family 52 subfamily Z member 121157933667157934632Rat
1333560Or52z13olfactory receptor family 52 subfamily Z member 131157958861157959808Rat
1334238Or52z14olfactory receptor family 52 subfamily Z member 141157970990157971952Rat
1333416Or51v14olfactory receptor family 51 subfamily V member 141157980431157981372Rat
1334390Or51v8bolfactory receptor family 51 subfamily V member 8B1157987781157988725Rat
1334316Or52ae8olfactory receptor family 52 subfamily AE member 81158002968158003921Rat
1598222Nrbf2-ps1nuclear receptor binding factor 2, pseudogene 11158017949158018810Rat
1333820Or51b6c-ps1olfactory receptor family 51 subfamily B member 6C, pseudogene 11158025825158026778Rat
1332852Or51v17-ps1olfactory receptor family 51 subfamily V member 17, pseudogene 11158033824158034857Rat
1333589Or52z15-ps1olfactory receptor family 52 subfamily Z member 15, pseudogene 11158058298158059264Rat
1334425Or51b6bolfactory receptor family 51 subfamily B member 6B1158072748158073701Rat
1334212Or51v8olfactory receptor family 51 subfamily V member 81158080680158081624Rat
1332659Or52ae8bolfactory receptor family 52 subfamily AE member 8B1158097260158098213Rat
1334424Or52a20olfactory receptor family 52 subfamily A member 201158108489158109439Rat
2319730Or52a20l1olfactory receptor family 52 subfamily A member 20 like 11158123097158125018Rat
1333546Or52ae9olfactory receptor family 52 subfamily AE member 91158130946158131893Rat
1332630Or51l4olfactory receptor family 51 subfamily L member 41158146732158147691Rat
1333008Or52a5bolfactory receptor family 52 subfamily A member 5B1158160904158161854Rat
1333141Or52a5olfactory receptor family 52 subfamily A member 51158182988158183935Rat
1334327Or52z1olfactory receptor family 52 subfamily Z member 11158206284158207246Rat
1597422Hbb-bshemoglobin, beta adult s chain1158218356158219741Rat
1595848Hbb-b1hemoglobin, beta adult major chain1158224175158231675Rat
2290038Hbbl1hemoglobin subunit beta like 11158236972158238348Rat
41201883Hbb-b2hemoglobin, beta adult minor chain1158243696158245076Rat
2783Hbbhemoglobin subunit beta1158250421158251832Rat
1591909Hbe1l-ps1hemoglobin subunit epsilon 1 like, pseudogene 11158266601158267985Rat
620306Hbg1hemoglobin subunit gamma 11158271871158273426Rat
1564524Hbe2hemoglobin, epsilon 21158279285158280913Rat
1305115Hbe1hemoglobin subunit epsilon 11158282931158458855Rat
1332980Or51b4bolfactory receptor family 51 subfamily B member 4B1158308648158309583Rat
1333816Or51b4olfactory receptor family 51 subfamily B member 41158317228158318151Rat
1333394Or51b17olfactory receptor family 51 subfamily B member 171158327466158328389Rat
1333371Or51b6olfactory receptor family 51 subfamily B member 61158347649158348596Rat
1332595Or51m1-ps1olfactory receptor family 51 subfamily M member 1, pseudogene 11158367523158368480Rat
1333257Olr134-psolfactory receptor pseudogene 1341158382033158382413Rat
1334260Or51k2olfactory receptor family 51 subfamily K member 21158389143158390081Rat
1333481Or51k7olfactory receptor family 51 subfamily K member 71158401733158402686Rat
1596113Tmed5-ps1transmembrane p24 trafficking protein 5, pseudogene 11158424491158425578Rat
1334354Or51q1dolfactory receptor family 51 subfamily Q member 1D1158426462158427427Rat
1333984Or51k1b-ps1olfactory receptor family 51 subfamily K member 1B, pseudogene 11158432453158433446Rat
40953947LOC120099899MLV-related proviral Env polyprotein-like1158445311158447321Rat
1333861Or51q1olfactory receptor family 51 subfamily Q member 11158456134158457081Rat
1594809Snx12-ps1sorting nexin 12, pseudogene 11158460071158460615Rat
1334277Or51q1eolfactory receptor family 51 subfamily Q member 1E1158482153158483100Rat
1332931Or51k1olfactory receptor family 51 subfamily K member 11158486849158487799Rat
1334127Or51i1olfactory receptor family 51 subfamily I member 11158502581158503525Rat
1332767Or51i2olfactory receptor family 51 subfamily I member 21158513673158514611Rat
1333953Or51a10olfactory receptor family 51 subfamily A member 101158520743158521687Rat
1333379Or51a42olfactory receptor family 51 subfamily A member 421158542552158543496Rat
1334175Or51a24-ps1olfactory receptor family 51 subfamily A member 24, pseudogene 11158552371158553319Rat
1334236Or52d1b-ps1olfactory receptor family 52 subfamily D member 1B, pseudogene 11158565007158565881Rat
1333972Or52d1olfactory receptor family 52 subfamily D member 11158578401158579372Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
38112D1Rat1712361155866514155866750Ratregion
5501772MARC_12039-12040:1004039373:14271155912713155913140Ratregion
1639643D1Got4241141155931397155931511Ratregion
5087612PMC55360P33591155961599155961958Ratregion
5089059AU0489301281155988173155988301Ratregion
5035094STS-Z40910571156151436156151493Ratregion
5071516RH1351272191156154967156155186Ratregion
5055947RH1440952251156157835156158060Ratregion
4890009D1Smu132161156170341156170557Ratregion
62506D1Uia92831156175532156176007Ratregion
5028095X750141831156182774156182957Ratregion
5053061RH1424312121156182775156182987Ratregion
5040368RH1282431961156182790156182986Ratregion
5505268Inppl16511156184005156184656Ratregion
5505266Inppl113561156196343156197699Ratregion
5032935RH1370191971156200106156200303Ratregion
5057157D1Bda293481156220011156220359Ratregion
5075684RH1387362141156265725156265939Ratregion
5040842RH1285152171156267962156268179Ratregion
5079420RH1409861871156277361156277548Ratregion
5054097RH1430291091156285308156285417Ratregion
60202D1Got1532401156323989156324231Ratregion
5029895BF3941042461156361028156361274Ratregion
5063818AW5353021751156365780156365955Ratregion
5057165D1Bda332361156371888156372124Ratregion
5046144RH1315831911156376300156376491Ratregion
1631302D1Got3221291156409581156409710Ratregion
5030839BE1140481811156413130156413311Ratregion
5076414RH1391621311156454993156455124Ratregion
5043910RH1302991861156460369156460555Ratregion
5501187PMC152292P21441156464667156464811Ratregion
5049496RH1335141891156473502156473691Ratregion
5042510RH1294771931156486938156487131Ratregion
5084294AA7996091211156494576156494697Ratregion
5027339AI8492861371156494611156494748Ratregion
5050878RH1343101861156524269156524455Ratregion
5087268AA9247442021156528798156529000Ratregion
5080540RH1416381901156564737156564927Ratregion
5035456AI4071541521156571296156571448Ratregion
5078412RH1403272171156606769156606986Ratregion
5050232RH1339372101156617048156617258Ratregion
5040584RH1283672191156617832156618051Ratregion
5057221D1Bda692971156618726156619023Ratregion
36105D1Rat511861156677124156677310Ratregion
5036589AU0485261921156696131156697074Ratregion
36404D1Mgh341311156801485156801626Ratregion
5501441MGI:12768969041156817358156818262Ratregion
5060112BI2794621731156847740156847913Ratregion
5081236RH1420441871156848656156848843Ratregion
5505680UniSTS:48922610061156866373156867379Ratregion
152025233rs10757115901156922554156922554Ratregion
5047892RH1325892011156975150156975351Ratregion
5035258BM3837541781157043338157043516Ratregion
5507083UniSTS:2244271541157043475157043629Ratregion
5507595Bcl2l5751157043768157044343Ratregion
5035811PMC196230P15361157043771157044307Ratregion
5035947PMC316415P12241157043795157044019Ratregion
7205994Bcl2l15581157043910157044279Ratregion
5501023PMC123054P24191157043981157044400Ratregion
5047956RH1326262131157114352157114565Ratregion
5505794UniSTS:49387210801157134648157135728Ratregion
5086853BQ2066161921157150750157150942Ratregion
5080218RH1414532091157193803157194012Ratregion
502785312.MMHAP12FRD9.seq1931157205525157205718Ratregion
502785312.MMHAP12FRD9.seq1931157205525157205718Ratregion
502785312.MMHAP12FRD9.seq1931157243371157243564Ratregion
502785312.MMHAP12FRD9.seq1931157243371157243564Ratregion
505217713.MMHAP11FLE1.seq751157279554157279629Ratregion
5507501ECD079266691157292539157293208Ratregion
5505714UniSTS:4896009391157395778157396717Ratregion
60201D1Got1521851157801635157801822Ratregion
60201D1Got1521851157857247157857400Ratregion
5507331REN978892501158026012158026262Ratregion
5507329REN978882531158026236158026489Ratregion
5507329REN978882531158073159158073412Ratregion
5032379AI0363441091158218397158218506Ratregion
7205996Hbb-b11151158218599158219353Ratregion
5057159D1Bda302941158231101158231395Ratregion
7205996Hbb-b11151158237209158237963Ratregion
7205996Hbb-b11151158243935158244689Ratregion
5057159D1Bda302941158251317158251611Ratregion
5070101RH944731241158251954158252078Ratregion
5089335AU0490951311158261055158261186Ratregion
5504482PMC21968P11461158271995158272946Ratregion
5505214Hbb-bh13401158272088158273363Ratregion
5504482PMC21968P11461158283058158283923Ratregion
5050360RH1340119201158283128158284048Ratregion
5505014Hbb-y7961158283138158283934Ratregion
5501113PMC139749P41391158284008158284265Ratregion
7193027Hbb-y591158284016158284075Ratregion
5504404PMC193707P1771158288886158288962Ratregion
5507331REN978892501158348164158348414Ratregion
5505586UniSTS:4850789391158389142158390081Ratregion
5505698UniSTS:4894459451158502580158503525Ratregion
60203D1Got1542691158591747158592016Ratregion
Position Markers

Flank 1: (D1Rat171)
Rat AssemblyChrPosition (strand)Source
GRCr81165,278,545 - 165,278,781 (+)Marker Load Pipeline
mRatBN7.21155,866,514 - 155,866,750 (+)MAPPER
Rnor_6.01166,577,232 - 166,577,467NCBI
Rnor_5.01172,767,534 - 172,767,769UniSTS
RGSC_v3.41158,964,262 - 158,964,498RGD
RGSC_v3.41158,964,263 - 158,964,498UniSTS
RGSC_v3.11159,043,280 - 159,043,515RGD
Celera1153,947,476 - 153,947,711UniSTS
RH 3.4 Map11267.5UniSTS
RH 3.4 Map11267.5RGD
SHRSP x BN Map179.01UniSTS
SHRSP x BN Map179.01RGD
FHH x ACI Map172.14RGD
Cytogenetic Map1q32UniSTS
Flank 2: (D1Got154)
Rat AssemblyChrPosition (strand)Source
GRCr81168,003,629 - 168,003,898 (+)Marker Load Pipeline
mRatBN7.21158,591,747 - 158,592,016 (+)MAPPER
Rnor_6.01169,318,579 - 169,318,847NCBI
Rnor_5.01175,466,328 - 175,466,596UniSTS
RGSC_v3.41161,961,517 - 161,961,786RGD
RGSC_v3.41161,961,518 - 161,961,786UniSTS
RGSC_v3.11162,055,402 - 162,055,670RGD
Celera1156,589,892 - 156,590,160UniSTS
RH 3.4 Map11300.2RGD
RH 3.4 Map11300.2UniSTS


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4889419Cstrr2Cold stress response QTL 20.05urine catecholamine amount (VT:0010502)absolute change in urine norepinephrine level (CMO:0001634)1155866514158592016Rat
61442Strs1Sensitivity to stroke QTL 17.4cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)1121767634166767634Rat
1578778Pur4Proteinuria QTL 43.30.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1150700247252085048Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512256448636Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)149393172159356837Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1144267353251128347Rat
1598866Bp287Blood pressure QTL 2875.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121006655166006655Rat
1578770Stresp23Stress response QTL 23kidney sympathetic nerve activity (VT:0004050)stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio (CMO:0001786)1123350408182418476Rat
70160Bw18Body weight QTL 185.7body mass (VT:0001259)body weight (CMO:0000012)1144267353196383668Rat
7794788Mcs32Mammary carcinoma susceptibility QTL 322.61mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)1115540693238914717Rat
631199Cm23Cardiac mass QTL 234.60.0004heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1115585465172949803Rat
1354636Lmblg1Limb length QTL 16.4tibia length (VT:0004357)tibia length (CMO:0000450)1151162512201278233Rat
1598850Bp297Blood pressure QTL 2972.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121006655166006655Rat
1549837Hcar15Hepatocarcinoma resistance QTL 150.05liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1153136852260522016Rat
152025235Bw194Body weight QTL 1944.86body mass (VT:0001259)1123556856242907031Rat
1598853Memor3Memory QTL 34.5exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)1143506580212458660Rat
1354634Kidm12Kidney mass QTL 123.9kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)1151162512201278233Rat
4889428Stresp24Stress response QTL 240.05heart pumping trait (VT:2000009)absolute change in electrocardiographic low frequency R-R spectral component to high frequency R-R spectral component ratio (CMO:0002162)1155866514200866514Rat
152025232Bw192Body weight QTL 1923.93body mass (VT:0001259)1117917486196963478Rat
1578759Uae30Urinary albumin excretion QTL 303.30.003urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1150700247252085048Rat
61343Bp28Blood pressure QTL 28arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1151646613196646613Rat
724521Uae1Urinary albumin excretion QTL 13.80.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)190508614173018436Rat
1358902Bw47Body weight QTL 471.67body mass (VT:0001259)body weight (CMO:0000012)190508614180359386Rat
61348Bp30Blood pressure QTL 302.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1144017057197814409Rat
8655649Arrd1Age-related retinal degeneration QTL 14.89retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1100357752183970443Rat
2303622Vencon6Ventilatory control QTL 60.001respiration trait (VT:0001943)respiration rate (CMO:0000289)1154561505199561505Rat
7771612Cm80Cardiac mass QTL 808.4heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)1149448574221264292Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)194642644214537671Rat
631202Gluco13Glucose level QTL 130.0001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1131763437159756369Rat
631205Bp196Blood pressure QTL 19640.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118944897199050459Rat
1300158Bp173Blood pressure QTL 1733.48arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)1115540693185145286Rat
631206Niddm40Non-insulin dependent diabetes mellitus QTL 40blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1136745990163747690Rat
737828Hcas3Hepatocarcinoma susceptibility QTL 34.9liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)1144267353222987745Rat
1331749Hrtrt11Heart rate QTL 112.973heart pumping trait (VT:2000009)heart rate (CMO:0000002)194494440198211706Rat
1354661Bw33Body weight QTL 335.2body mass (VT:0001259)body weight (CMO:0000012)1151162512256448636Rat
1358886Bp260Blood pressure QTL 2603.67arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1151162766225824951Rat
1331751Bp199Blood pressure QTL 1993.60022arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)194494440181830018Rat
9685799Bp375Blood pressure QTL 375arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501170611501Rat
2293140Bp313Blood pressure QTL 313arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121833674166833674Rat
724531Uae5Urinary albumin excretion QTL 54urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)1150700142252085212Rat
9685802Bp376Blood pressure QTL 376arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1126540680171540680Rat
1641895Bp298Blood pressure QTL 298arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1123350408182418476Rat
70209Niddm23Non-insulin dependent diabetes mellitus QTL 232.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)194494440198324465Rat
1354580Scort1Serum corticosterone level QTL 13.4blood corticosterone amount (VT:0005345)blood corticosterone level (CMO:0001172)1156677124256448636Rat
634315Niddm45Non-insulin dependent diabetes mellitus QTL 457.16blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1144267916172949660Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
61379Bp44Blood pressure QTL 4419.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1144267916174133260Rat
1331793Bp200Blood pressure QTL 2003.71601arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)194494440172949803Rat
2313060Bss71Bone structure and strength QTL 712.60.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)1118944747163944747Rat
2312420Pur17Proteinuria QTL 177.10.0001urine protein amount (VT:0005160)urine total protein excretion rate (CMO:0000756)1156677124218753816Rat
6893347Bw98Body weight QTL 980.20.53body mass (VT:0001259)body weight (CMO:0000012)1133680936178680936Rat
1354591Cm36Cardiac mass QTL 364.1heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1102813953201278233Rat
724550Thym3Thymus enlargement QTL 37.820.001thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1136829932181829932Rat
7421630Bp362Blood pressure QTL 3620.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118608292241799120Rat
71118Thym1Thymus enlargement QTL 110.170.001thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1136829932181829932Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132356093162846471Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat
631519Pia11Pristane induced arthritis QTL 115.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1136830018181830018Rat
6893361Bw104Body weight QTL 1040.590.27body mass (VT:0001259)body weight (CMO:0000012)1133680936178680936Rat
738006Anxrr14Anxiety related response QTL 1440.00035locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1130636910175636910Rat
1558645Bw55Body weight QTL 553.20.004body mass (VT:0001259)body weight (CMO:0000012)1133680936178680936Rat
1354615Cm32Cardiac mass QTL 325.2heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1102813953201278233Rat
1582204Livw1Liver weight QTL 13.60.0003liver mass (VT:0003402)liver weight to body weight ratio (CMO:0000633)1155422851172949803Rat
634348Bp138Blood pressure QTL 138arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501168883176Rat
1354610Bw34Body weight QTL 344.1body mass (VT:0001259)body weight (CMO:0000012)1151162512256448636Rat
738028Anxrr12Anxiety related response QTL 124.90.00001locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1130636910175636910Rat
1354620Kidm19Kidney mass QTL 194kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512201278233Rat
8693608Alc24Alcohol consumption QTL 242.30.74drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)1150452391168228760Rat
1354618Kidm15Kidney mass QTL 155kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)1156677124201278233Rat
631654Bp107Blood pressure QTL 107arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501170611501Rat
631544Bp84Blood pressure QTL 845.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123350408181759564Rat
152025212Bw190Body weight QTL 1905.7body mass (VT:0001259)1123556856196963478Rat
631549Bp89Blood pressure QTL 895.7arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123350581201284552Rat
631548Bp88Blood pressure QTL 8850.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1156677124176484451Rat
1358189Cstrr1Cold stress response QTL 10.0001catecholamine amount (VT:0010543)urine norepinephrine level (CMO:0001629)1123350408182418476Rat
1354606Bp246Blood pressure QTL 2463.6arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)1102813953218753816Rat
1354602Bw35Body weight QTL 3512.2body mass (VT:0001259)body weight (CMO:0000012)1151162512201278233Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general software package: ANOVA or Student's t-test 4889147
qtl_general measurement method: rats were kept in metabolic cages for 6 h and urine was collected at room temperature, next day urine was collected for 6 h when the cages were at 40C 4889147
qtl_general systolic blood pressure was lower in all the SHRSP-based congenics as compared to SHRSP 4889147
qtl_general number of animals used:12 weeks old male rats 4889147