Ssrq6_m QTL Report (Mus musculus) - Rat Genome Database

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QTL: Ssrq6_m (stress response QTL 6 (mouse)) Mus musculus

Symbol: Ssrq6_m
Name: stress response QTL 6 (mouse)
RGD ID: 4141586
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3912100,532,075 - 102,461,265MOUSEQTLGRCm39
GRCm3812100,565,816 - 102,495,006MOUSEQTLGRCm38
cM Map12syntenicMOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



References

References - curated
# Reference Title Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
Additional References at PubMed
PMID:17913702  


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1320167Cpsf2cleavage and polyadenylation specific factor 212101940345101972252Mouse
1332234Atxn3ataxin 312101885160101928139Mouse
1317780Golga5golgin A512102435372102464274Mouse
1314129Rin3Ras and Rab interactor 312102248572102358982Mouse
1557313Trip11thyroid hormone receptor interactor 1112101800304101879463Mouse
1552555Lgmnlegumain12102360341102405987Mouse
1552432Ppp4r3aprotein phosphatase 4 regulatory subunit 3A12101005668101051721Mouse
1614071D130020L05RikRIKEN cDNA D130020L05 gene12101048710101055186Mouse
1618358Ccdc88ccoiled-coil domain containing 88C12100877778100995610Mouse
1323377DglucyD-glutamate cyclase12100745316100838869Mouse
1615960Mylf-psmyosin light chain, alkali, fast skeletal muscle, pseudogene12101187969101188677Mouse
1618837Catsperbcation channel sperm associated auxiliary subunit beta12101370904101592268Mouse
1620579Slc24a4solute carrier family 24 (sodium/potassium/calcium exchanger), member 412102094986102239562Mouse
1319966Gpr68G protein-coupled receptor 6812100842941100874457Mouse
1617474Kif4-pskinesin family member 4, pseudogene12101111868101115532Mouse
1621701Gm8482predicted pseudogene 848212100830153100830772Mouse
1318047Rps6ka5ribosomal protein S6 kinase, polypeptide 512100514692100691693Mouse
736146Fbln5fibulin 512101712820101785541Mouse
1621588Rnu3b-ps3U3B small nuclear RNA pseudogene 312102219632102220044Mouse
1624741A630072L19RikRIKEN cDNA A630072L19 gene12100905378100910479Mouse
1557309Tc2ntandem C2 domains, nuclear12101611705101685178Mouse
2299608Ndufb1NADH:ubiquinone oxidoreductase subunit B112101934355101941997Mouse
2299636Gm2614predicted gene 261412100710737100711208Mouse
4833137Mir1190microRNA 119012100987932100988027Mouse
5138587Gm20036predicted gene, 2003612101878926101881912Mouse
5142707Gm18848predicted gene, 1884812101171964101172773Mouse
5142759Gm18795predicted gene, 1879512101184435101249969Mouse
7182282Gm21056predicted gene, 2105612101069794101071809Mouse
9618694Gm36756predicted gene, 3675612100952888100981077Mouse
9603321Gm30198predicted gene, 3019812102413587102434135Mouse
9643270Gm36572predicted gene, 3657212100854330100875358Mouse
10008280Gm40558predicted gene, 4055812100729668100744004Mouse
14996033Gm22749predicted gene, 2274912101189851101189957Mouse
15018988Gm52022predicted gene, 5202212101615538101615670Mouse
14999699Gm25801predicted gene, 2580112100735282100735387Mouse
14999769Gm25203predicted gene, 2520312102219732102219946Mouse
39131174Gm47639predicted gene, 4763912101008854101010858Mouse
163695997LOC128926998STARR-seq mESC enhancer starr_3308112100980193100985313Mouse
401702203LOC131380487STARR-seq mESC enhancer starr_3308512101317905101319169Mouse
401700548LOC131380493STARR-seq mESC enhancer starr_3309812102451044102454749Mouse
401713636LOC131380484STARR-seq mESC enhancer starr_3306812100782431100784608Mouse
401714970LOC131380488STARR-seq mESC enhancer starr_3308612101598116101599705Mouse
401714671LOC131380481STARR-seq mESC enhancer starr_3305912100649716100650851Mouse
401710216LOC131380489STARR-seq mESC enhancer starr_3308812101750556101752074Mouse
401710411LOC131380483STARR-seq mESC enhancer starr_3306412100742870100746461Mouse
401706893LOC131380492STARR-seq mESC enhancer starr_3309612102378819102379215Mouse
401707909LOC131380491STARR-seq mESC enhancer starr_3309312101941392101943043Mouse
401708896LOC131380485STARR-seq mESC enhancer starr_3308312101048471101051497Mouse
401703590LOC131380490STARR-seq mESC enhancer starr_3309112101836799101838184Mouse
401705353LOC131380482STARR-seq mESC enhancer starr_3306112100724423100727071Mouse
401705645LOC131380486STARR-seq mESC enhancer starr_3308412101075422101076942Mouse
401832234LOC132442682STARR-positive B cell enhancer ABC_E717012102417793102418094Mouse
401833831LOC132442674STARR-positive B cell enhancer ABC_E145112100691538100691839Mouse
401832123LOC132442679STARR-positive B cell enhancer ABC_E850212100994447100994748Mouse
401832876LOC132442678STARR-positive B cell enhancer ABC_E716912100960370100960671Mouse
401835502LOC132442676STARR-positive B cell enhancer ABC_E850012100807498100807799Mouse
401838157LOC132442681STARR-positive B cell enhancer ABC_E186212102405895102406196Mouse
401838381LOC132442677STARR-positive B cell enhancer ABC_E850112100918446100918747Mouse
401838394LOC132442685STARR-positive B cell enhancer ABC_E717112102434877102435178Mouse
401839449LOC132442673STARR-positive B cell enhancer mm9_chr12:101842850-10184315112100570899100571200Mouse
401838277LOC132442684STARR-positive B cell enhancer ABC_E915012102427500102427800Mouse
401839508LOC132442683STARR-positive B cell enhancer ABC_E306612102419831102420132Mouse
401842019LOC132442675STARR-positive B cell enhancer ABC_E849912100706558100706859Mouse
401841282LOC132442680STARR-positive B cell enhancer ABC_E145212101924422101924723Mouse

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142002Tbqt3_mtibia bone quality traits 3 (mouse)Not determined1235285496109936243Mouse
27226793Feml10_mfemur length 10, 5 week (mouse)1268346774113363620Mouse
4141738Tgq23_mtriglyceride QTL 23 (mouse)Not determined72112877106112877Mouse
1301926Adip6_madiposity 6 (mouse)Not determined1273887422107887526Mouse
1301689Skull18_mskull morphology 18 (mouse)Not determined1273887422107887526Mouse
13524842Ppiq10a_mprepulse inhibition QTL 10a (mouse)1277512220111512220Mouse
4141610Tailaq1_mtail length adjusted QTL 1 (mouse)Not determined80956708113383533Mouse
4142401Egq10_mearly growth QTL 10 (mouse)Not determined80956708113383533Mouse
4141335W6q10_mweight 6 weeks QTL 10 (mouse)Not determined80956708113383533Mouse
39128213Lwq23_mliver weight QTL 10 (mouse)1280956708113383533Mouse
13524849Ppiq11a_mprepulse inhibition QTL 11a (mouse)1280989143114989143Mouse
25823169Hrsq8_mhost response to SARS QTL 8, log titer (mouse)1281696245108495368Mouse
13524846Ppiq11_mprepulse inhibition QTL 11 (mouse)1282666396116666396Mouse
1301492Dbsty3_mdiabesity 3 (mouse)Not determined1283532075117532224Mouse
1301879Insq10_minsulin QTL 10 (mouse)Not determined1283532075117532224Mouse
1300883Ath21_matherosclerosis 21 (mouse)Not determined1285961579119961683Mouse
10412156Nociq3_mnociceptive sensitivity inflammatory QTL 3 (mouse)Not determined1286396075114831653Mouse
4142007Chlq17_mcirculating hormone level QTL 17 (mouse)Not determined1288052874120092757Mouse
1300545Lifespan3_mlife span 3 (mouse)Not determined1288052874120092757Mouse
1301308Prdt4_mprion disease incubation time 4 (mouse)Not determined1288308354120092757Mouse
5491194Mobq3_mmultigenic obesity QTL 3 (mouse)Not determined1289664071120092757Mouse
1301836Heal5_mwound healing/regeneration 5 (mouse)Not determined1289939031120092757Mouse
1301922Bbaa6_mB.burgdorferi-associated arthritis 6 (mouse)Not determined1290308268120092757Mouse
12910790Pwgrq7_mpre-weaning growth rate QTL 7 (mouse)1290937367108645308Mouse
10402491Dipa4_mdrug induced psychomotor activation 4 (mouse)Not determined1291222515120092757Mouse
10412192Bbaa27_mB.burgdorferi-associated arthritis 27 (mouse)Not determined1291254220107308393Mouse
12910532Nrq10a_mnoise-induced hearing loss resistant QTL 10a (mouse)1292750025120092757Mouse
12910533Nrq10_mnoise-induced hearing loss resistant QTL 10 (mouse)1292750025120092757Mouse
1357463Vtbt14_mvertebral trabecular bone trait 14 (mouse)Not determined1292936097120092757Mouse
1300973Abmm_mantibody mediated myocarditis (mouse)Not determined1293264461120092757Mouse
11039526Ccc1_mcolitis susceptibility in the Collaborative Cross 1 (mouse)1293528334111028223Mouse
1302177Dps2_mdelta power in slow-wave sleep 2 (mouse)Not determined1294146064120092757Mouse
1302138Im6_mimmunoregulatory 6 (mouse)Not determined1296860337120092757Mouse
1301269Sluc12_msusceptibility to lung cancer 12 (mouse)Not determined1296860337120092757Mouse
4141586Ssrq6_mstress response QTL 6 (mouse)Not determined100532075102461265Mouse
10412075Nils1_mneointima lesion size 1 (mouse)Not determined12102024665120092757Mouse


Additional Information

Database Acc Id Source(s)
MGD MGI:3776148 MouseQtl

RGD Curation Notes
Note Type Note Reference