Msmr2_m QTL Report (Mus musculus) - Rat Genome Database

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QTL: Msmr2_m (MSM lymphoma resistance 2 (mouse)) Mus musculus

Symbol: Msmr2_m
Name: MSM lymphoma resistance 2 (mouse)
RGD ID: 4141431
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm391854,975,873 - 61,238,870MOUSEQTLGRCm39
GRCm381854,842,801 - 61,105,798MOUSEQTLGRCm38
cM Map18syntenicMOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
1. Mouse Genome Database (MGD)
2. RGD automated import pipeline
Additional References at PubMed
PMID:8706013  


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1550577Zfp608zinc finger protein 608185488804554992591Mouse
10024190Gm41732predicted gene, 41732185490171854922728Mouse
11082861Gm4221predicted gene 4221185499029555078400Mouse
10037663Gm41731predicted gene, 41731185502258055037312Mouse
15002558Gm24183predicted gene, 24183185508556555085657Mouse
9679629Gm34073predicted gene, 34073185509175355143752Mouse
9644700Gm34011predicted gene, 34011185512683855131249Mouse
14996483Gm22597predicted gene, 22597185517984055179919Mouse
9666815Gm34233predicted gene, 34233185541944155461034Mouse
9596317Gm34295predicted gene, 34295185559208655646080Mouse
39130505LOC110120563VISTA enhancer mm1061185562401655627654Mouse
10031796Gm41733predicted gene, 41733185569290655701532Mouse
10031680Gm41734predicted gene, 41734185572676455733834Mouse
9596229Gm34345predicted gene, 34345185576320155768202Mouse
39130992LOC110120565VISTA enhancer mm1581185578485455787217Mouse
2295808Gm8614predicted gene 8614185583779555838966Mouse
2310873Gm6942predicted gene 6942185584156955843178Mouse
10012867Gm41735predicted gene, 41735185592996655979030Mouse
15021121Gm52332predicted gene, 52332185592996655979036Mouse
2295830Gm6944predicted gene 6944185597226855973494Mouse
10025092Gm41736predicted gene, 41736185603142856033086Mouse
14998330Gm23555predicted gene, 23555185619299956193133Mouse
5143034Gm18527predicted gene, 18527185637898656379508Mouse
1322246Gramd3GRAM domain containing 3185638748556503792Mouse
2310848Gm8629predicted gene 8629185639014356390802Mouse
39131092LOC102637792uncharacterized LOC102637792185640347156431923Mouse
2310842Gm8642predicted gene 8642185651824056519379Mouse
1318490Aldh7a1aldehyde dehydrogenase family 7, member A1185652472256572991Mouse
9675795Mir1258microRNA 1258185653813956538198Mouse
1618391Phaxphosphorylated adaptor for RNA export185656256956587712Mouse
1615890Tex43testis expressed 43185658760956594783Mouse
10040809Gm41738predicted gene, 41738185668641356698116Mouse
10026023Gm41737predicted gene, 41737185669625056698116Mouse
733221Lmnb1lamin B1185670781356753424Mouse
1552609Marchf3membrane associated ring-CH-type finger 3185676171656925515Mouse
9999840Gm15345predicted gene 15345185679543356801861Mouse
39130095LOC109280014VISTA enhancer mm109185689691856898991Mouse
10008310Gm41739predicted gene, 41739185689880856903688Mouse
5143480Gm18087predicted gene, 18087185691536056916089Mouse
9611573Gm34632predicted gene, 34632185692574356968320Mouse
1624794Gm10536predicted gene 10536185693626056940518Mouse
1313542C330018D20RikRIKEN cDNA C330018D20 gene185695582856975379Mouse
5142818Gm18739predicted gene, 18739185711673057117281Mouse
5141410Gm19486predicted gene, 19486185711957157119930Mouse
1558549Megf10multiple EGF-like-domains 10185713309057297467Mouse
5143234Gm18322predicted gene, 18322185714898757149791Mouse
5142622Gm18929predicted gene, 18929185733550357338193Mouse
39128785LOC115488949small nucleolar RNA SNORA48185735098957351129Mouse
2308536Gm10266predicted gene 10266185735421457355627Mouse
1621490Prrc1proline-rich coiled-coil 1185735473357392956Mouse
11083292Gm19500predicted gene, 19500185740541557416150Mouse
9598570Gm34982predicted gene, 34982185741974757430261Mouse
1613815Ctxn3cortexin 3185746775157478134Mouse
16097291700066O22RikRIKEN cDNA 1700066O22 gene185750442257533752Mouse
1623912Ccdc192coiled-coil domain containing 192185753374257731067Mouse
16167134930511M06RikRIKEN cDNA 4930511M06 gene185754536157552397Mouse
5142819Gm18740predicted gene, 18740185758800857588811Mouse
16143292210409D07RikRIKEN cDNA 2210409D07 gene185763207957638585Mouse
14996936Gm26038predicted gene, 26038185766945357669558Mouse
11082729Gm19519predicted gene, 19519185777416457792333Mouse
9677904Gm35751predicted gene, 35751185780301357828835Mouse
732817Slc12a2solute carrier family 12, member 2185787851257946821Mouse
733429Fbn2fibrillin 2185800862358210572Mouse
10019793Gm41741predicted gene, 41741185821029558215455Mouse
10000863Gm26507predicted gene, 26507185821551158222911Mouse
15020029Gm52334predicted gene, 52334185840890358427783Mouse
1618986Slc27a6solute carrier family 27 (fatty acid transporter), member 6185855624058612869Mouse
14999848Gm23270predicted gene, 23270185861535958615489Mouse
1550976Isoc1isochorismatase domain containing 1185865948258679570Mouse
39128696LOC115488953small nucleolar RNA SNORA48185877722858777376Mouse
1318083Adamts19a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 19185883599259053682Mouse
5143479Gm18088predicted gene, 18088185893018458931119Mouse
1323760Minar2membrane integral NOTCH2 associated receptor 2185906218959076962Mouse
9643621Gm35100predicted gene, 35100185908664859179248Mouse
1616679Chsy3chondroitin sulfate synthase 3185917534059411336Mouse
5142501Gm19051predicted gene, 19051185924519359245906Mouse
15020757Gm52338predicted gene, 52338185954831059551731Mouse
9639431Mir6355microRNA 6355185957963059579735Mouse
2295725Gm8697predicted gene 8697185977410859774471Mouse
9661608Gm35234predicted gene, 35234185982543159864721Mouse
10016044Gm41742predicted gene, 41742185986510559876844Mouse
5143348Gm18217predicted gene, 18217185989757759898087Mouse
10040603Gm41743predicted gene, 41743185994370460059515Mouse
5143343Gm18218predicted gene, 18218186018511660185898Mouse
1614893Gm4951predicted gene 4951186021200460248440Mouse
2294297Gm5970predicted gene 5970186022074860222275Mouse
12795177Gm45947predicted gene, 45947186025718560271350Mouse
1618985Gm4841predicted gene 4841186026830160273267Mouse
12795025Gm46635predicted gene, 46635186027137960283874Mouse
1614892F830016B08RikRIKEN cDNA F830016B08 gene186028873960303823Mouse
12795551Gm46612predicted gene, 46612186032481760326833Mouse
1618488Gm8714predicted gene 8714186036144360362672Mouse
1550485Iigp1interferon inducible GTPase 1186037361660392634Mouse
1623464Gm6960predicted pseudogene 6960186042624260427273Mouse
1313062BC023105cDNA sequence BC023105186043843160443320Mouse
1622164Smim3small integral membrane protein 3186047419160518949Mouse
12793490Gm46628predicted gene, 46628186050411560508089Mouse
733942Dctn4dynactin 4186052615460558766Mouse
9633126Gm35403predicted gene, 35403186054574760560567Mouse
15022196Gm52358predicted gene, 52358186055817260560741Mouse
1314004Rbm22RNA binding motif protein 22186056078660572729Mouse
1318423Myoz3myozenin 3186057371760591716Mouse
735344Synposynaptopodin186059398160660173Mouse
7181161G630071F17RikRIKEN cDNA G630071F17 gene186066341060671624Mouse
39130572LOC114827937VISTA enhancer mm1623186066909560671807Mouse
736720Ndst1N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1186068449460749035Mouse
62317Rps14ribosomal protein S14186077459660778546Mouse
2295635Gm8731predicted gene 8731186077890660782676Mouse
1553657Cd74CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)186080384960812652Mouse
5134311Mir5107microRNA 5107186081207660812163Mouse
1320416Tcof1treacle ribosome biogenesis factor 1186081373860848983Mouse
10025195Gm41744predicted gene, 41744186085920860868826Mouse
10022046Gm41745predicted gene, 41745186088307260888997Mouse
39130914LOC109280094VISTA enhancer mm879186090454960907221Mouse
1321030Arsiarylsulfatase i186091199160919506Mouse
10284Camk2acalcium/calmodulin-dependent protein kinase II alpha186092530760988152Mouse
9632705Mir7220microRNA 7220186095387360953932Mouse
9617111Mir6982microRNA 6982186095807360958140Mouse
12798396Gm46632predicted gene, 46632186098016160981366Mouse
1332525Slc6a7solute carrier family 6 (neurotransmitter transporter, L-proline), member 7186099537661014416Mouse
1321204Cdx1caudal type homeobox 1186101886261036199Mouse
15022788Gm52351predicted gene, 52351186103557661044713Mouse
11070Pdgfrbplatelet derived growth factor receptor, beta polypeptide186104512761085067Mouse
39130968LOC111188155Csf1r promoter/intronic regulatory region186110240661109627Mouse
10412Csf1rcolony stimulating factor 1 receptor186110557261131139Mouse

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
7194525Aldh7a1182185652679656526977Mouseregion
7194920Lamb1-1155185675323956753393Mouseregion
7194929Lmnb1131185675321656753347Mouseregion
4897813BB086802110185508299155083100Mouseregion
4897815AU015154230185899147158991700Mouseregion
4897817BE690921146186028167460281819Mouseregion
4898297RH126555239186077697360778473Mouseregion
4899407RH136247203185695622556956427Mouseregion
4899897RH136502181185658723156587411Mouseregion
4898799RH135940197186047531260475508Mouseregion
4899421RH136254183185658698256587164Mouseregion
4901161RH133228180185941106159411240Mouseregion
4900726RH129991186186076797360768158Mouseregion
491451324.MMHAP33FRH9.seq157185545199255452148Mouseregion
491618142.MMHAP85FRF12.seq179185488522754885405Mouseregion
4907291AW455934126186099551860995643Mouseregion
4907293U8103095186081408660814180Mouseregion
4907295AW209012145186081614860816291Mouseregion
4907283AI84363995185677545556775549Mouseregion
4907285L3979097185800951758009613Mouseregion
4907287AI046432193186039175660391948Mouseregion
4918557U13174182185794418557944366Mouseregion
4909186AI52880992186108358261083673Mouseregion
4919119mHAa31e11.seq183185847387258474054Mouseregion
4923397D18Mit12190185503750155037590Mouseregion
4923399D18Mit122150185666155856661706Mouseregion
4923403D18Mit124150185745748757457636Mouseregion
4923510D18Mit181148185799479557994941Mouseregion
4923614D18Mit238122185702175757021878Mouseregion
4923618D18Mit280186017804860178271Mouseregion
4923654D18Mit52141185833761558337755Mouseregion
4923695D18Mit78135186080867560808809Mouseregion
4923714D18Mit91140185538014855380287Mouseregion
4917486MHAa31c8.seq179185848716358487341Mouseregion
4907289AW11192280186039221560392294Mouseregion
4910864Rbm22600186057082760572247Mouseregion
491305507.MMHAP9FRC7.seq192185485278354852974Mouseregion
4923435D18Mit140134186110566561105798Mouseregion
4923693D18Mit77285186080395860804241Mouseregion
4935484D18Mit205124185878699458787117Mouseregion
4936048RH124210131186042709360427222Mouseregion
4937176RH124778174186081617360816346Mouseregion
4937889RH125135118186098749260987609Mouseregion
4941598Iigp10186038979560390950Mouseregion
4941598Iigp10186024537860246515Mouseregion
4958144AW061306111185650273256502842Mouseregion
4950644UniSTS:237814201185738931557389515Mouseregion
4950630UniSTS:237804223185497135954971581Mouseregion
4950638UniSTS:237809100185497831354978412Mouseregion
4950646UniSTS:237815221185867843458678654Mouseregion
4962206RH135192195186055850060558694Mouseregion
4963004UniSTS:224182103185961373759613839Mouseregion
4963094UniSTS:224229104185912842959128532Mouseregion
4953389PMC154349P1402186080790860808309Mouseregion
4954511D18Mit123117185597060555970721Mouseregion
4955831RH126229247185658721456587460Mouseregion
4960447AI66221592185941106359411154Mouseregion
4960449AW046661145186059408760594231Mouseregion
4950634UniSTS:237810121185676030856760428Mouseregion
4950642UniSTS:237813214185739240657392619Mouseregion
4950640UniSTS:237811202185650053456500735Mouseregion
4950648UniSTS:237816220186068653860686757Mouseregion
4952024BE120994216185773086357731078Mouseregion
4963185UniSTS:224281155186007298560073139Mouseregion
4963326UniSTS:224353158186068455660684713Mouseregion
4963426UniSTS:224406163185941217159412333Mouseregion
4963496UniSTS:224446179186036873960368917Mouseregion
4964082UniSTS:224768152185868015958680310Mouseregion
4964231UniSTS:224845194186055849960558692Mouseregion
4964445UniSTS:224960191185922207059222260Mouseregion
4965018UniSTS:225275156186098735960987514Mouseregion
4954670D18Mit90128185484280154842928Mouseregion
5003278D8Mco1318185770636857707800Mouseregion
4974368D5S1606E163186077641260776952Mouseregion
4983884PMC343810P597186060129060601386Mouseregion
5012170Slc12a2260185794451157944770Mouseregion
5012406Tcof1150186082169060821839Mouseregion
5010832Ii158186080863760808791Mouseregion
5006648Camk2a206186098440660984834Mouseregion
5008476D18Mit218130185559272055592849Mouseregion
7195327Cdx1637186101911561019751Mouseregion
7195328Cdx1105186101923161019335Mouseregion
5494573D3S14960185649190556492941Mouseregion
5494429stSG613347658185742930657429963Mouseregion

QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226723Tibw9_mtibia width 9, proximal, 16 week (mouse)18320000060800000Mouse
1558849W3q15_mweight 3 weeks QTL 15 (mouse)Not determined18504111961139571Mouse
1357603Mom3_mmodifier of Min 3 (mouse)Not determined181389696666965891Mouse
11532709Sluc41_msusceptibility to lung cancer 41 (mouse)182082063757457636Mouse
13463476Hctq8_mhematocrit QTL 8 (mouse)182108452755084674Mouse
1301570Sluc14_msusceptibility to lung cancer 14 (mouse)Not determined182248686156487074Mouse
1300877Adip8_madiposity 8 (mouse)Not determined182248686156487074Mouse
11532710Sluc41a_msusceptibility to lung cancer 41a (mouse)182248686156487074Mouse
11532715Sluc41b_msusceptibility to lung cancer 41b (mouse)182248686156487074Mouse
11532716Sluc41c_msusceptibility to lung cancer 41c (mouse)182248686156487074Mouse
4142031Moen1_mmodifier of engrailed QTL 1 (mouse)Not determined182398250757982677Mouse
25823173Hrsq12_mhost response to SARS QTL 12, hemorrhage (mouse)182476282478296340Mouse
12904950Smmq3_msoleus muscle mass QTL 3 (mouse)182592381059923810Mouse
25823167Hrsq5_mhost response to SARS QTL 5, D3% weight (mouse)182710806258694005Mouse
25823171Hrsq10_mhost response to SARS QTL 10, D4% weight (mouse)182710806258694005Mouse
25823174Hrsq11_mhost response to SARS QTL 11, log titer (mouse)182710806258694005Mouse
1301400Lmr13_mleishmaniasis resistance 13 (mouse)Not determined182797631361976451Mouse
4141857Mhysq5_mmale hybrid sterility QTL 5 (mouse)Not determined2799753761997672Mouse
1302163Bmd16_mbone mineral density 16 (mouse)Not determined182953484763534993Mouse
12880412V125Dq12_mvitamin D active form serum level QTL 12 (mouse)183010000064100000Mouse
1300685Scc5_mcolon tumor susceptibility 5 (mouse)Not determined183185541365855562Mouse
1357690Vtbt19_mvertebral trabecular bone trait 19 (mouse)Not determined183295797666958154Mouse
1301771Pcyts6_mplasmacytoma susceptibility 6 (mouse)Not determined183552556069525779Mouse
4142366Chlq10_mcirculating hormone level QTL 10 (mouse)Not determined183615795070158108Mouse
15039381Ltgq8_mliver triglyceride QTL 8 (mouse)183807349772073497Mouse
15039383Mvlq5_mmicrovesicular liver lesion QTL 5 (mouse)183807349772073497Mouse
15039384Liviq1_mliver inflammation QTL 1 (mouse)183807349772073497Mouse
15039386Mvlq4_mmacrovesicular liver lesion QTL 4 (mouse)183807349772073497Mouse
12050070Nabq2_mnasal bone morphology QTL 2 (mouse)183897060572970721Mouse
1357639Obsty4_mobesity 4 (mouse)Not determined183948686184620653Mouse
1301902Hrtfm4_mheart failure modifier 4 (mouse)Not determined184317804877178271Mouse
1301215Thcr_mT helper cell response (mouse)Not determined184499753768645706Mouse
12904745Carcdq2_mcardiac collagen deposition QTL 2 (mouse)184629021680290216Mouse
10412184Sstapa1_mSuseptibility to Staphylococus aureus infection 1 (mouse)Not determined184640847957457636Mouse
11039493Ltpr8d_mLeishmania tropica response 8d (mouse)184674183280741971Mouse
11039494Ltpr8b_mLeishmania tropica response 8b (mouse)184674183280741971Mouse
27226720Tibw5_mtibia width 5, proximal, 10 week (mouse)185030000062500000Mouse
1357630Tgq1_mtriglyceride QTL 1 (mouse)Not determined185091908584919240Mouse
11252137Modvl5_mmodifier of vacuolated lens 5 (mouse)185091908584919240Mouse
1302099Hdlq30_mHDL QTL 30 (mouse)Not determined185153522985535397Mouse
10412244Par5_mpulmonary adenoma resistance 5 (mouse)Not determined185153522985535397Mouse
1301853Heal9_mwound healing/regeneration 9 (mouse)Not determined185267220586672345Mouse
1302050Radpf4_mradiation pulmonary fibrosis 4 (mouse)Not determined185283308468645706Mouse
4142443Pgis1_mproteoglycan induced spondylitis 1 (mouse)Not determined185315795076826598Mouse
4141431Msmr2_mMSM lymphoma resistance 2 (mouse)Not determined5484280161105798Mouse
1301500Szs4_mseizure susceptibility 4 (mouse)Not determined185484280185496018Mouse
12880410V125Dq13_mvitamin D active form serum level QTL 13 (mouse)185630000090300000Mouse
12880430Fgf23lq4_mFGF23 serum level QTL 4 (mouse)185630000090300000Mouse
10412183Sstapa2_mSuseptibility to Staphylococus aureus infection 2 (mouse)Not determined185666155866819414Mouse
12880428V125Dq14_mvitamin D active form serum level QTL 14 (mouse)185730000090702639Mouse
1301353Lbw6_mlupus NZB x NZW 6 (mouse)Not determined185742926790702639Mouse
4141132Eae18_mexperimental allergic encephalomyelitis susceptibility 18 (mouse)Not determined5745748782586603Mouse
4140971Mbmq1_mmale body mass QTL 1 (mouse)Not determined5785721090702639Mouse
12910791Pwgrq8_mpre-weaning growth rate QTL 8 (mouse)185788832769216071Mouse
11039492Ltpr8a_mLeishmania tropica response 8a (mouse)185904702190702639Mouse
11039495Ltpr8c_mLeishmania tropica response 8c (mouse)185904702190702639Mouse
11049564Lmr29_mleishmaniasis resistance 29 (mouse)185904702190702639Mouse
1301103Pgia11_mproteoglycan induced arthritis 11 (mouse)Not determined185982648990702639Mouse
1302109Sluc28_msusceptibility to lung cancer 28 (mouse)Not determined185984762690702639Mouse
38455998Cdtm1_mCD62L+ CD8 TM cells 1 (mouse)186000000080000000Mouse


Additional Information

Database Acc Id Source(s)
MGD MGI:107710 MouseQtl

RGD Curation Notes
Note Type Note Reference