GWAS1001258_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1001258_H (free cholesterol measurement, very low density lipoprotein cholesterol measurement QTL GWAS1001258 (human)) Homo sapiens

Symbol: GWAS1001258_H
Name: free cholesterol measurement, very low density lipoprotein cholesterol measurement QTL GWAS1001258 (human)
RGD ID: 407352282
Trait: triglyceride measurement
Measurement Type: blood cholesterol level   (CMO:0002280)    
blood lipid measurement   (CMO:0000050)    
blood lipoprotein triglyceride level   (CMO:0002685)    
blood triglyceride level   (CMO:0000118)    
blood uric acid level   (CMO:0000501)    
blood very low density lipoprotein cholesterol level   (CMO:0000648)    
LOD Score: Not Available
P Value: 1.0E-15
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38126,958,422 - 26,958,423RGD_MAPPER_PIPELINEGRCh38
GRCh37127,284,913 - 27,284,914RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS1001258_HHumanblood cholesterol level  IAGPrs79598313405850206Based on the EFO term IDGWAS_CATALOGPMID:35213538
GWAS1001258_HHumanblood lipid measurement  IAGPrs79598313405850206Based on the EFO term IDGWAS_CATALOGPMID:35213538
GWAS1001258_HHumanblood lipoprotein triglyceride level  IAGPrs79598313405850206Based on the EFO term IDGWAS_CATALOGPMID:38448586
GWAS1001258_HHumanblood triglyceride level  IAGPrs79598313405850206Based on the EFO term IDGWAS_CATALOGPMID:35213538
GWAS1001258_HHumanblood uric acid level  IAGPrs79598313405850206Based on the EFO term IDGWAS_CATALOGPMID:31578528
GWAS1001258_HHumanblood very low density lipoprotein cholesterol level  IAGPrs79598313405850206Based on the EFO term IDGWAS_CATALOGPMID:35213538

Experimental Factor Annotations    Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1602654KDF1keratinocyte differentiation factor 112694956226960468Human

Position Markers

Peak: (rs79598313)
Human AssemblyChrPosition (strand)Source
GRCh38126,958,422 - 26,958,423RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407380168GWAS1029144_Hsex hormone-binding globulin measurement QTL GWAS1029144 (human)8e-39sex hormone-binding globulin measurement12695842226958423Human
407354695GWAS1003671_Hfatty acid measurement QTL GWAS1003671 (human)1e-08fatty acid measurement12695842226958423Human
407313859GWAS962835_HHMG CoA reductase inhibitor use measurement QTL GWAS962835 (human)2e-15total cholesterol in small VLDLblood intermediate density lipoprotein phospholipid level (CMO:0001574)12695842226958423Human
407364161GWAS1013137_Hcholesterol esters in medium LDL measurement QTL GWAS1013137 (human)4e-19cholesterol esters in medium LDL measurement12695842226958423Human
407353280GWAS1002256_Htriglycerides:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS1002256 (human)1e-16remnant cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)12695842226958423Human
407120589GWAS769565_Hlow density lipoprotein cholesterol measurement QTL GWAS769565 (human)7e-10low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)12695842226958423Human
407350605GWAS999581_Hfatty acid measurement QTL GWAS999581 (human)7e-09fatty acid measurement12695842226958423Human
407363031GWAS1012007_Htotal lipids in large LDL QTL GWAS1012007 (human)1e-17total lipids in large LDL12695842226958423Human
407353175GWAS1002151_Hvery low density lipoprotein cholesterol measurement, phospholipid measurement QTL GWAS1002151 (human)5e-16very low density lipoprotein cholesterol measurement, phospholipid measurementblood very low density lipoprotein cholesterol level (CMO:0000648)12695842226958423Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
407364178GWAS1013154_Hlow density lipoprotein cholesterol measurement QTL GWAS1013154 (human)3e-20low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)12695842226958423Human
407261392GWAS910368_Hfree androgen index QTL GWAS910368 (human)3e-36free androgen index12695842226958423Human
407347024GWAS996000_Hserum alanine aminotransferase measurement QTL GWAS996000 (human)3e-13serum alanine aminotransferase measurementblood cholesterol level (CMO:0002280)12695842226958423Human
407354972GWAS1003948_Hfatty acid measurement QTL GWAS1003948 (human)5e-10fatty acid measurement12695842226958423Human
407349851GWAS998827_Hserum alanine aminotransferase measurement QTL GWAS998827 (human)5e-13serum alanine aminotransferase measurementblood high density lipoprotein cholesterol level (CMO:0000052)12695842226958423Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
407328986GWAS977962_Hlow density lipoprotein cholesterol measurement QTL GWAS977962 (human)5e-11low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)12695842226958423Human
407353178GWAS1002154_Hvery low density lipoprotein cholesterol measurement QTL GWAS1002154 (human)2e-16phospholipids in small LDL measurement blood low density lipoprotein phospholipid level (CMO:0001568)12695842226958423Human
407352282GWAS1001258_Hfree cholesterol measurement, very low density lipoprotein cholesterol measurement QTL GWAS1001258 (human)1e-15urate measurementblood uric acid level (CMO:0000501)12695842226958423Human
407358297GWAS1007273_Hcholesterol in very small VLDL measurement QTL GWAS1007273 (human)6e-11cholesterol in very small VLDL measurement 12695842226958423Human
407353048GWAS1002024_Hvery low density lipoprotein cholesterol measurement, phospholipid measurement QTL GWAS1002024 (human)3e-16triglycerides in very small VLDL measurementblood very low density lipoprotein triglyceride level (CMO:0002688)12695842226958423Human
407355494GWAS1004470_Hfree cholesterol measurement QTL GWAS1004470 (human)4e-12total cholesterol in medium VLDLblood cholesterol level (CMO:0002280)12695842226958423Human
407383149GWAS1032125_Hurate measurement QTL GWAS1032125 (human)0.0000001urate measurementblood uric acid level (CMO:0000501)12695842226958423Human
407292910GWAS941886_Hhigh density lipoprotein cholesterol measurement QTL GWAS941886 (human)3e-19phospholipids in medium LDL measurementblood low density lipoprotein phospholipid level (CMO:0001568)12695842226958423Human
407357166GWAS1006142_Htotal cholesterol in IDL QTL GWAS1006142 (human)8e-15total cholesterol in IDL12695842226958423Human
406910059GWAS559035_Htriglyceride measurement QTL GWAS559035 (human)3e-10milk polyunsaturated fatty acid amount (VT:0010374)blood low density lipoprotein cholesterol level (CMO:0000053)12695842226958423Human
407350762GWAS999738_Hlow density lipoprotein cholesterol measurement, free cholesterol:total lipids ratio QTL GWAS999738 (human)5e-12fatty acid measurementblood low density lipoprotein cholesterol level (CMO:0000053)12695842226958423Human
407350890GWAS999866_Hchylomicron measurement, very low density lipoprotein cholesterol measurement, lipid measurement QTL GWAS999866 (human)1e-13alkaline phosphatase measurementblood alkaline phosphatase activity level (CMO:0000576)12695842226958423Human
407356393GWAS1005369_Htriglycerides in large LDL measurement QTL GWAS1005369 (human)8e-14triglycerides in large LDL measurement 12695842226958423Human
407357431GWAS1006407_Hesterified cholesterol measurement, low density lipoprotein cholesterol measurement QTL GWAS1006407 (human)2e-18esterified cholesterol measurement, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)12695842226958423Human
407350518GWAS999494_Htriglyceride measurement, phospholipid measurement QTL GWAS999494 (human)7e-23triglyceride measurement, phospholipid measurementblood triglyceride level (CMO:0000118)12695842226958423Human
407363318GWAS1012294_Htotal cholesterol in large LDL QTL GWAS1012294 (human)2e-17total cholesterol in large LDL12695842226958423Human
407351029GWAS1000005_Htriglycerides:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS1000005 (human)3e-22triglycerides:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)12695842226958423Human
407357171GWAS1006147_Hapolipoprotein B measurement QTL GWAS1006147 (human)9e-21apolipoprotein B measurementblood apoliprotein B level (CMO:0000522)12695842226958423Human
407354739GWAS1003715_Hchylomicron measurement, very low density lipoprotein cholesterol measurement QTL GWAS1003715 (human)9e-14chylomicron measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)12695842226958423Human
406910069GWAS559045_Htriglyceride measurement QTL GWAS559045 (human)3e-09cholesterol:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)12695842226958423Human
407243123GWAS892099_Hbody fat percentage QTL GWAS892099 (human)2e-20body fat percentagebody fat percentage (CMO:0000302)12695842226958423Human
407353840GWAS1002816_Hcholesterol:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS1002816 (human)8e-17cholesterol:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)12695842226958423Human
407361791GWAS1010767_Hlow density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratio QTL GWAS1010767 (human)7e-14low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratioblood low density lipoprotein cholesterol level (CMO:0000053)12695842226958423Human
407358588GWAS1007564_Hapolipoprotein A 1 measurement, apolipoprotein B measurement QTL GWAS1007564 (human)3e-24apolipoprotein A 1 measurement, apolipoprotein B measurementblood apoliprotein B level (CMO:0000522)12695842226958423Human
407351546GWAS1000522_Hcholesteryl ester measurement, high density lipoprotein cholesterol measurement QTL GWAS1000522 (human)5e-14blood lipid amount (VT:0003949)systolic blood pressure (CMO:0000004)12695842226958423Human
407354375GWAS1003351_Hphospholipids:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS1003351 (human)2e-12phospholipids:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)12695842226958423Human
407351046GWAS1000022_Hvery low density lipoprotein cholesterol measurement, cholesterol:total lipids ratio QTL GWAS1000022 (human)2e-09very low density lipoprotein cholesterol measurement, cholesterol:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)12695842226958423Human
407363589GWAS1012565_Hintermediate density lipoprotein measurement QTL GWAS1012565 (human)6e-17intermediate density lipoprotein measurementblood intermediate density lipoprotein cholesterol level (CMO:0001562)12695842226958423Human
407363331GWAS1012307_Hlow density lipoprotein cholesterol measurement, lipid measurement QTL GWAS1012307 (human)8e-20low density lipoprotein cholesterol measurement, lipid measurementblood lipid measurement (CMO:0000050)12695842226958423Human
407351298GWAS1000274_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS1000274 (human)7e-17triglyceride measurement, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)12695842226958423Human
406914953GWAS563929_Hlow density lipoprotein cholesterol measurement QTL GWAS563929 (human)5e-08low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)12695842226958423Human
406914952GWAS563928_Hlow density lipoprotein cholesterol measurement QTL GWAS563928 (human)3e-08sex hormone-binding globulin measurementblood low density lipoprotein particle diameter (CMO:0002693)12695842226958423Human
407363598GWAS1012574_Hcholesterol esters in large LDL measurement QTL GWAS1012574 (human)5e-18cholesterol esters in large LDL measurement12695842226958423Human
407355534GWAS1004510_Htotal lipids in very small VLDL measurement QTL GWAS1004510 (human)7e-16total lipids in very small VLDL measurement12695842226958423Human
407353614GWAS1002590_Htriglycerides:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS1002590 (human)9e-18triglycerides:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)12695842226958423Human
406913806GWAS562782_Hhigh density lipoprotein cholesterol measurement QTL GWAS562782 (human)1e-14very low density lipoprotein particle size measurementblood very low density lipoprotein particle diameter (CMO:0002694)12695842226958423Human
407356936GWAS1005912_Hcholesterol esters in medium VLDL measurement QTL GWAS1005912 (human)1e-11cholesterol esters in medium VLDL measurement12695842226958423Human
407247383GWAS896359_Hcholesteryl ester measurement QTL GWAS896359 (human)8e-10blood lipid amount (VT:0003949)blood very low density lipoprotein cholesterol level (CMO:0000648)12695842226958423Human
407351059GWAS1000035_Htriglycerides:total lipids ratio, very low density lipoprotein cholesterol measurement QTL GWAS1000035 (human)4e-08pulse pressure measurementpulse pressure (CMO:0000292)12695842226958423Human
407078426GWAS727402_Hheel bone mineral density QTL GWAS727402 (human)1e-09heel bone mineral densitybone mineral density (CMO:0001226)12695842226958423Human
407296927GWAS945903_Hsystolic blood pressure QTL GWAS945903 (human)2e-13triglycerides in small LDL measurement blood low density lipoprotein cholesterol level (CMO:0000053)12695842226958423Human
407357726GWAS1006702_Htriglycerides in medium LDL measurement QTL GWAS1006702 (human)1e-12triglycerides in medium LDL measurement 12695842226958423Human
407260319GWAS909295_Hsex hormone-binding globulin measurement QTL GWAS909295 (human)5e-117sex hormone-binding globulin measurement12695842226958423Human
407355292GWAS1004268_Htotal cholesterol measurement, low density lipoprotein cholesterol measurement QTL GWAS1004268 (human)3e-18total cholesterol measurement, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)12695842226958423Human
407351836GWAS1000812_Hcholesteryl esters:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS1000812 (human)2e-11triglyceride measurement, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)12695842226958423Human
407354136GWAS1003112_Hvery low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratio QTL GWAS1003112 (human)7e-11very low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)12695842226958423Human
407352615GWAS1001591_Hchylomicron measurement, total cholesterol measurement, very low density lipoprotein cholesterol measurement QTL GWAS1001591 (human)4e-13chylomicron measurement, total cholesterol measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)12695842226958423Human
407355300GWAS1004276_Hlinoleic acid measurement QTL GWAS1004276 (human)8e-13linoleic acid measurementblood free fatty acids level (CMO:0000117)12695842226958423Human
407355811GWAS1004787_Hsaturated fatty acids measurement QTL GWAS1004787 (human)4e-10saturated fatty acids measurement 12695842226958423Human
407362094GWAS1011070_Hfree cholesterol in medium LDL measurement QTL GWAS1011070 (human)2e-19free cholesterol in medium LDL measurement 12695842226958423Human
407352237GWAS1001213_Htriglyceride measurement, high density lipoprotein cholesterol measurement QTL GWAS1001213 (human)9e-13blood lipid amount (VT:0003949)blood very low density lipoprotein cholesterol level (CMO:0000648)12695842226958423Human
407355564GWAS1004540_Hfree cholesterol in medium VLDL measurement QTL GWAS1004540 (human)3e-12free cholesterol in medium VLDL measurement 12695842226958423Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human
407359401GWAS1008377_Hlow density lipoprotein cholesterol measurement QTL GWAS1008377 (human)1e-19low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)12695842226958423Human
407358903GWAS1007879_Htotal cholesterol measurement QTL GWAS1007879 (human)4e-11total cholesterol measurementblood total cholesterol level (CMO:0000051)12695842226958423Human
407357750GWAS1006726_Hvery low density lipoprotein cholesterol measurement, esterified cholesterol measurement QTL GWAS1006726 (human)3e-14very low density lipoprotein cholesterol measurement, esterified cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)12695842226958423Human
407359668GWAS1008644_Hurate measurement QTL GWAS1008644 (human)2e-33urate measurementblood uric acid level (CMO:0000501)12695842226958423Human
407148209GWAS797185_Htype 2 diabetes mellitus QTL GWAS797185 (human)5e-09diastolic blood pressurediastolic blood pressure (CMO:0000005)12695842226958423Human
407357618GWAS1006594_Htriglycerides:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS1006594 (human)6e-14triglycerides:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)12695842226958423Human
407359410GWAS1008386_Hesterified cholesterol measurement, intermediate density lipoprotein measurement QTL GWAS1008386 (human)9e-15urate measurementblood uric acid level (CMO:0000501)12695842226958423Human
406913462GWAS562438_Hhigh density lipoprotein cholesterol measurement QTL GWAS562438 (human)4e-14high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)12695842226958423Human
407333181GWAS982157_HC-reactive protein measurement QTL GWAS982157 (human)2e-10esterified cholesterol measurementblood C-reactive protein level (CMO:0003160)12695842226958423Human
407356605GWAS1005581_Hfree cholesterol in very small VLDL measurement QTL GWAS1005581 (human)2e-14free cholesterol in very small VLDL measurement 12695842226958423Human
407358013GWAS1006989_Htotal lipids in small VLDL QTL GWAS1006989 (human)3e-15total lipids in small VLDL12695842226958423Human
407356345GWAS1005321_Hfree cholesterol in small LDL measurement QTL GWAS1005321 (human)1e-18free cholesterol in small LDL measurement 12695842226958423Human
407352889GWAS1001865_Hvery low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratio QTL GWAS1001865 (human)1e-10sex hormone-binding globulin measurementblood low density lipoprotein cholesterol level (CMO:0000053)12695842226958423Human
407379510GWAS1028486_Hsex hormone-binding globulin measurement QTL GWAS1028486 (human)4e-18sex hormone-binding globulin measurement12695842226958423Human
407355064GWAS1004040_Htotal lipids in IDL QTL GWAS1004040 (human)6e-16total lipids in IDL12695842226958423Human
407351992GWAS1000968_Hvery low density lipoprotein cholesterol measurement, lipid measurement QTL GWAS1000968 (human)4e-16cholesteryl esters:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)12695842226958423Human
407356088GWAS1005064_Hcholesterol:total lipids ratio, cholesteryl esters:total lipids ratio QTL GWAS1005064 (human)7e-13chylomicron measurement, triglyceride measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)12695842226958423Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS559035_H GCST007142 Triglycerides 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals C NR 3E-10 9.523 rs79598313 0.088 triglyceride measurement (EFO:0004530)
 PMID:29507422
GWAS559045_H GCST007142 Triglycerides 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals C 0.979 3E-9 8.523 rs79598313 0.086 triglyceride measurement (EFO:0004530)
 PMID:29507422
GWAS562438_H GCST007140 High density lipoprotein cholesterol levels 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals C 0.979 4E-14 13.398 rs79598313 0.099 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:29507422
GWAS562782_H GCST007140 High density lipoprotein cholesterol levels 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals C NR 1E-14 14 rs79598313 0.098 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:29507422
GWAS563928_H GCST007141 Low density lipoprotein cholesterol levels 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals C 0.979 3E-8 7.523 rs79598313 0.092 low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:29507422
GWAS563929_H GCST007141 Low density lipoprotein cholesterol levels 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals C NR 5E-8 7.302 rs79598313 0.086 low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:29507422
GWAS727402_H GCST006979 Heel bone mineral density 426,824 British ancestry individuals C 0.976412 1E-9 9 rs79598313 0.0376245 heel bone mineral density (EFO:0009270)
 PMID:30598549
GWAS769565_H GCST002898 LDL cholesterol up 62,166 European ancestry individuals T 0.02 7E-10 9.155 rs79598313 0.12 low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:25961943
GWAS797185_H GCST010557 Type 2 diabetes 148,726 European ancestry cases, 24,646 African American cases, 8,616 Hispanic cases, 46,511 Asian ancestry cases, 965,732 European ancestry controls, 31,446 African American controls, 11,829 Hispanic controls, 169,776 Asian ancestry controls C 0.9767 5E-9 8.302 rs79598313 0.0867 PMID:32541925
GWAS892099_H GCST90432179 Body fat percentage (adjusted for testosterone and SHBG) 157,937 British ancestry males ? NR 2E-20 19.699 rs79598313 0.56 body fat percentage (EFO:0007800)
 PMID:37867527
GWAS896359_H GCST90269582 Cholesteryl esters in chylomicrons and extremely large VLDL (UKB data field 23485) 88,329 European ancestry individuals T 0.023258 8E-10 9.097 rs79598313 0.0934499 cholesteryl ester measurement (EFO:0010351)
 PMID:36764567
GWAS909295_H GCST90239821 Sex hormone-binding globulin levels 163,363 British ancestry men ? NR 5E-117 116.302 rs79598313 0.239168 sex hormone-binding globulin measurement (EFO:0004696)
 PMID:36653534
GWAS910368_H GCST90239823 Free androgen index 162,068 British ancestry men ? NR 3E-36 35.523 rs79598313 0.139399 free androgen index (EFO:0007005)
 PMID:36653534
GWAS941886_H GCST006611 HDL cholesterol 215,551 European ancestry individuals, 57,332 African American individuals, 24,743 Hispanic individuals T 0.0216 3E-19 18.523 rs79598313 0.0898 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:30275531
GWAS945903_H GCST006624 Systolic blood pressure 757,601 European ancestry individuals T 0.0251 2E-13 12.699 rs79598313 0.5926 systolic blood pressure (EFO:0006335)
 PMID:30224653
GWAS962835_H GCST007931 Medication use (HMG CoA reductase inhibitors) 73,475 European ancestry cases, 216,910 European ancestry controls T 0.0236446 2E-15 14.699 rs79598313 0.14663698 HMG CoA reductase inhibitor use measurement (EFO:0009932)
 PMID:31015401
GWAS977962_H GCST011347 Low density lipoprotein cholesterol levels 76,081 European ancestry individuals, 127,395 Japanese ancestry individuals ? NR 5E-11 10.302 rs79598313 0.113 low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:33339817
None Available GCST011348 High density lipoprotein cholesterol levels 76,081 European ancestry individuals, 127,395 Japanese ancestry individuals ? NR 3E-9 8.523 rs79598313 0.1034 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:33339817
GWAS982157_H GCST011350 C-reactive protein levels 76,081 European ancestry individuals, 127,395 Japanese ancestry individuals ? NR 2E-10 9.699 rs79598313 0.119 C-reactive protein measurement (EFO:0004458)
 PMID:33339817
GWAS996000_H GCST90129602 Chronic elevation of alanine aminotransferase (cALT) levels 95,472 European ancestry cases, 68,725 European ancestry controls T 0.023 3E-13 12.523 rs79598313 0.18 serum alanine aminotransferase measurement (EFO:0004735)
 PMID:35654975
GWAS998827_H GCST90129601 Chronic elevation of alanine aminotransferase (cALT) levels 95,472 European ancestry cases, 68,725 European ancestry controls, 23,977 African American cases, 13,387 African American controls, 7,650 Hispanic cases, 7,468 Hispanic controls, 1,088 Asian ancestry cases, 828 Asian ancestry controls T 0.021 5E-13 12.302 rs79598313 0.172 serum alanine aminotransferase measurement (EFO:0004735)
 PMID:35654975
GWAS999494_H GCST90092983 Ratio of triglycerides to phosphoglycerides 115,006 European ancestry individuals C 0.976788 7E-23 22.155 rs79598313 0.125166 triglyceride measurement (EFO:0004530)
phospholipid measurement (EFO:0004639)
 PMID:35213538
GWAS999581_H GCST90092994 Degree of unsaturation 115,006 European ancestry individuals C 0.976788 7E-9 8.155 rs79598313 0.0752467 fatty acid measurement (EFO:0005110)
 PMID:35213538
GWAS999738_H GCST90092909 Free cholesterol to total lipids ratio in medium LDL 115,082 European ancestry individuals C 0.976799 5E-12 11.302 rs79598313 0.0903551 low density lipoprotein cholesterol measurement (EFO:0004611)
free cholesterol:total lipids ratio (EFO:0020945)
 PMID:35213538
GWAS999866_H GCST90093046 Total lipid levels in chylomicrons and extremely large VLDL 115,082 European ancestry individuals C 0.976799 1E-13 13 rs79598313 0.0981809 chylomicron measurement (EFO:0008596)
very low density lipoprotein cholesterol measurement (EFO:0008317)
lipid measurement (EFO:0004529)
 PMID:35213538
GWAS1000005_H GCST90092955 Triglycerides to total lipids ratio in small HDL 115,082 European ancestry individuals C 0.976799 3E-22 21.523 rs79598313 0.125835 triglycerides:total lipids ratio (EFO:0020947)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS1000022_H GCST90092917 Cholesterol to total lipids ratio in medium VLDL 115,082 European ancestry individuals C 0.976799 2E-9 8.699 rs79598313 0.077154 very low density lipoprotein cholesterol measurement (EFO:0008317)
cholesterol:total lipids ratio (EFO:0020943)
 PMID:35213538
GWAS1000035_H GCST90092927 Triglycerides to total lipids ratio in medium VLDL 115,082 European ancestry individuals C 0.976799 4E-8 7.398 rs79598313 0.0711546 triglycerides:total lipids ratio (EFO:0020947)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS1000274_H GCST90092966 Triglyceride levels in small LDL 115,082 European ancestry individuals C 0.976799 7E-17 16.155 rs79598313 0.11099 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS1000522_H GCST90092846 Cholesteryl ester levels in large HDL 115,082 European ancestry individuals C 0.976799 5E-14 13.302 rs79598313 0.0910698 cholesteryl ester measurement (EFO:0010351)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90093002 Average diameter for VLDL particles 115,082 European ancestry individuals C 0.976799 1E-14 14 rs79598313 0.0983657 very low density lipoprotein particle size measurement (EFO:0008594)
 PMID:35213538
GWAS1000812_H GCST90092847 Cholesteryl esters to total lipids ratio in large HDL 115,082 European ancestry individuals C 0.976799 2E-11 10.699 rs79598313 0.0872486 cholesteryl esters:total lipids ratio (EFO:0020944)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90092866 Triglyceride levels in large LDL 115,082 European ancestry individuals C 0.976799 2E-11 10.699 rs79598313 0.0905928 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
None Available GCST90092878 Triglyceride levels in large VLDL 115,082 European ancestry individuals C 0.976799 2E-15 14.699 rs79598313 0.104888 triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS1000968_H GCST90093022 Total lipid levels in very large VLDL 115,082 European ancestry individuals C 0.976799 4E-16 15.398 rs79598313 0.107112 very low density lipoprotein cholesterol measurement (EFO:0008317)
lipid measurement (EFO:0004529)
 PMID:35213538
GWAS1001213_H GCST90092954 Triglyceride levels in small HDL 115,082 European ancestry individuals C 0.976799 9E-13 12.046 rs79598313 0.094448 triglyceride measurement (EFO:0004530)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS1001258_H GCST90093020 Free cholesterol levels in very large VLDL 115,082 European ancestry individuals C 0.976799 1E-15 15 rs79598313 0.105856 free cholesterol measurement (EFO:0008591)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90093003 Triglyceride levels in VLDL 115,082 European ancestry individuals C 0.976799 4E-16 15.398 rs79598313 0.107091 triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90093017 Cholesterol to total lipids ratio in very large VLDL 114,160 European ancestry individuals C 0.976779 8E-10 9.097 rs79598313 0.0806193 very low density lipoprotein cholesterol measurement (EFO:0008317)
cholesterol:total lipids ratio (EFO:0020943)
 PMID:35213538
GWAS1001591_H GCST90093040 Cholesterol levels in chylomicrons and extremely large VLDL 115,082 European ancestry individuals C 0.976799 4E-13 12.398 rs79598313 0.0956811 chylomicron measurement (EFO:0008596)
total cholesterol measurement (EFO:0004574)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90092844 Cholesterol levels in large HDL 115,082 European ancestry individuals C 0.976799 5E-13 12.302 rs79598313 0.0873678 total cholesterol measurement (EFO:0004574)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90092871 Cholesteryl esters to total lipids ratio in large VLDL 115,071 European ancestry individuals C 0.976797 4E-8 7.398 rs79598313 0.0721335 very low density lipoprotein cholesterol measurement (EFO:0008317)
cholesteryl esters:total lipids ratio (EFO:0020944)
 PMID:35213538
GWAS1001865_H GCST90093019 Cholesteryl esters to total lipids ratio in very large VLDL 114,160 European ancestry individuals C 0.976779 1E-10 10 rs79598313 0.0847792 very low density lipoprotein cholesterol measurement (EFO:0008317)
cholesteryl esters:total lipids ratio (EFO:0020944)
 PMID:35213538
None Available GCST90092845 Cholesterol to total lipids ratio in large HDL 115,082 European ancestry individuals C 0.976799 3E-9 8.523 rs79598313 0.0766805 cholesterol:total lipids ratio (EFO:0020943)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS1002024_H GCST90092876 Phospholipid levels in large VLDL 115,082 European ancestry individuals C 0.976799 3E-16 15.523 rs79598313 0.107873 very low density lipoprotein cholesterol measurement (EFO:0008317)
phospholipid measurement (EFO:0004639)
 PMID:35213538
GWAS1002151_H GCST90093024 Phospholipid levels in very large VLDL 115,082 European ancestry individuals C 0.976799 5E-16 15.302 rs79598313 0.107122 very low density lipoprotein cholesterol measurement (EFO:0008317)
phospholipid measurement (EFO:0004639)
 PMID:35213538
GWAS1002154_H GCST90093023 Concentration of very large VLDL particles 115,082 European ancestry individuals C 0.976799 2E-16 15.699 rs79598313 0.108456 very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90093048 Phospholipid levels in chylomicrons and extremely large VLDL 115,082 European ancestry individuals C 0.976799 3E-13 12.523 rs79598313 0.0957666 chylomicron measurement (EFO:0008596)
very low density lipoprotein cholesterol measurement (EFO:0008317)
phospholipid measurement (EFO:0004639)
 PMID:35213538
GWAS1002256_H GCST90092855 Triglycerides to total lipids ratio in large HDL 115,082 European ancestry individuals C 0.976799 1E-16 16 rs79598313 0.106845 triglycerides:total lipids ratio (EFO:0020947)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90092875 Concentration of large VLDL particles 115,082 European ancestry individuals C 0.976799 4E-16 15.398 rs79598313 0.107474 very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90092874 Total lipid levels in large VLDL 115,082 European ancestry individuals C 0.976799 1E-15 15 rs79598313 0.105989 very low density lipoprotein cholesterol measurement (EFO:0008317)
lipid measurement (EFO:0004529)
 PMID:35213538
None Available GCST90092895 Cholesteryl esters to total lipids ratio in medium HDL 115,082 European ancestry individuals C 0.976799 4E-16 15.398 rs79598313 0.107596 cholesteryl esters:total lipids ratio (EFO:0020944)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS1002590_H GCST90092903 Triglycerides to total lipids ratio in medium HDL 115,082 European ancestry individuals C 0.976799 9E-18 17.046 rs79598313 0.112505 triglycerides:total lipids ratio (EFO:0020947)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90093038 Triglyceride levels in very small VLDL 115,082 European ancestry individuals C 0.976799 2E-13 12.699 rs79598313 0.0982229 triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90092890 Triglyceride levels in LDL 115,082 European ancestry individuals C 0.976799 2E-13 12.699 rs79598313 0.0984068 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS1002816_H GCST90092893 Cholesterol to total lipids ratio in medium HDL 115,082 European ancestry individuals C 0.976799 8E-17 16.097 rs79598313 0.108586 cholesterol:total lipids ratio (EFO:0020943)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90092889 Average diameter for LDL particles 115,082 European ancestry individuals C 0.976799 3E-8 7.523 rs79598313 0.0743626 low density lipoprotein particle size measurement (EFO:0008593)
 PMID:35213538
None Available GCST90092914 Triglyceride levels in medium LDL 115,082 European ancestry individuals C 0.976799 2E-15 14.699 rs79598313 0.10629 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS1003112_H GCST90092919 Cholesteryl esters to total lipids ratio in medium VLDL 115,082 European ancestry individuals C 0.976799 7E-11 10.155 rs79598313 0.0836229 very low density lipoprotein cholesterol measurement (EFO:0008317)
cholesteryl esters:total lipids ratio (EFO:0020944)
 PMID:35213538
GWAS1003351_H GCST90092901 Phospholipids to total lipids ratio in medium HDL 115,082 European ancestry individuals C 0.976799 2E-12 11.699 rs79598313 0.091471 phospholipids:total lipids ratio (EFO:0020946)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90093044 Free cholesterol levels in chylomicrons and extremely large VLDL 115,082 European ancestry individuals C 0.976799 3E-13 12.523 rs79598313 0.0959345 free cholesterol measurement (EFO:0008591)
chylomicron measurement (EFO:0008596)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS1003671_H GCST90092928 Monounsaturated fatty acid levels 115,006 European ancestry individuals C 0.976788 1E-8 8 rs79598313 0.0767246 fatty acid measurement (EFO:0005110)
 PMID:35213538
GWAS1003715_H GCST90093047 Concentration of chylomicrons and extremely large VLDL particles 115,082 European ancestry individuals C 0.976799 9E-14 13.046 rs79598313 0.098074 chylomicron measurement (EFO:0008596)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90092992 Total triglycerides levels 115,082 European ancestry individuals C 0.976799 1E-15 15 rs79598313 0.105861 triglyceride measurement (EFO:0004530)
 PMID:35213538
None Available GCST90092940 Ratio of polyunsaturated fatty acids to monounsaturated fatty acids 115,006 European ancestry individuals C 0.976788 5E-12 11.302 rs79598313 0.0907507 fatty acid measurement (EFO:0005110)
 PMID:35213538
GWAS1003948_H GCST90092941 Ratio of polyunsaturated fatty acids to total fatty acids 115,006 European ancestry individuals C 0.976788 5E-10 9.302 rs79598313 0.0818364 fatty acid measurement (EFO:0005110)
 PMID:35213538
GWAS1004040_H GCST90301981 Total lipids in IDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 6E-16 15.222 rs79598313 0.1037 total lipids in IDL (EFO:0022161)
 PMID:38448586
None Available GCST90302157 Concentration of very small VLDL particles 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 1E-16 16 rs79598313 0.1062 very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:38448586
GWAS1004268_H GCST90301991 Total cholesterol levels in LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0299 3E-18 17.523 rs79598313 0.1117 total cholesterol measurement (EFO:0004574)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
GWAS1004276_H GCST90301988 Linoleic acid (18:2) levels 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 8E-13 12.097 rs79598313 0.092 linoleic acid measurement (EFO:0006807)
 PMID:38448586
GWAS1004470_H GCST90301963 Free cholesterol levels 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 4E-12 11.398 rs79598313 0.0892 free cholesterol measurement (EFO:0008591)
 PMID:38448586
None Available GCST90302158 Phospholipids in very small VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 2E-16 15.699 rs79598313 0.1057 phospholipids in VLDL measurement (EFO:0022301)
 PMID:38448586
GWAS1004510_H GCST90302156 Total lipids in very small VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 7E-16 15.155 rs79598313 0.1035 total lipids in very small VLDL measurement (EFO:0022156)
 PMID:38448586
GWAS1004540_H GCST90302061 Free cholesterol in medium VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0301 3E-12 11.523 rs79598313 0.09 free cholesterol in medium VLDL measurement (EFO:0022269)
 PMID:38448586
None Available GCST90093042 Cholesteryl ester levels in chylomicrons and extremely large VLDL 115,082 European ancestry individuals C 0.976799 9E-13 12.046 rs79598313 0.0945925 cholesteryl ester measurement (EFO:0010351)
chylomicron measurement (EFO:0008596)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90302097 Total lipids in small LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 3E-19 18.523 rs79598313 0.1149 total lipids in small LDL (EFO:0022168)
 PMID:38448586
GWAS1004787_H GCST90302077 Saturated fatty acids 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 4E-10 9.398 rs79598313 0.0803 saturated fatty acids measurement (EFO:0022304)
 PMID:38448586
None Available GCST90302160 Triglycerides in very small VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0301 3E-16 15.523 rs79598313 0.1059 triglycerides in very small VLDL measurement (EFO:0022144)
 PMID:38448586
None Available GCST90301983 Phospholipids in IDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 2E-15 14.699 rs79598313 0.1018 phospholipids in IDL measurement (EFO:0022164)
 PMID:38448586
None Available GCST90302123 Total cholesterol levels in VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 1E-13 13 rs79598313 0.0953 total cholesterol measurement (EFO:0004574)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:38448586
GWAS1005064_H GCST90302094 Cholesteryl esters to total lipids ratio in small LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0298 7E-13 12.155 rs79598313 0.0916 cholesterol:total lipids ratio (EFO:0020943)
cholesteryl esters:total lipids ratio (EFO:0020944)
 PMID:38448586
None Available GCST90093050 Triglyceride levels in chylomicrons and extremely large VLDL 115,082 European ancestry individuals C 0.976799 7E-13 12.155 rs79598313 0.0950451 chylomicron measurement (EFO:0008596)
triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90302104 Total cholesterol in small VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 2E-15 14.699 rs79598313 0.1018 total cholesterol in small VLDL (EFO:0022171)
 PMID:38448586
GWAS1005321_H GCST90302095 Free cholesterol in small LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 1E-18 18 rs79598313 0.1129 free cholesterol in small LDL measurement (EFO:0022271)
 PMID:38448586
GWAS1005369_H GCST90302017 Triglycerides in large LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 8E-14 13.097 rs79598313 0.0959 triglycerides in large LDL measurement (EFO:0022319)
 PMID:38448586
GWAS1005581_H GCST90302154 Free cholesterol in very small VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 2E-14 13.699 rs79598313 0.0977 free cholesterol in very small VLDL measurement (EFO:0022275)
 PMID:38448586
None Available GCST90302112 Phospholipids in small VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0301 1E-13 13 rs79598313 0.0955 phospholipids in VLDL measurement (EFO:0022301)
 PMID:38448586
None Available GCST90301957 Esterified cholesterol levels 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 2E-10 9.699 rs79598313 0.0815 esterified cholesterol measurement (EFO:0008589)
 PMID:38448586
GWAS1005912_H GCST90302059 Cholesterol esters in medium VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 1E-11 11 rs79598313 0.0873 cholesterol esters in medium VLDL measurement (EFO:0022182)
 PMID:38448586
GWAS1006142_H GCST90301975 Total Cholesterol in IDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0299 8E-15 14.097 rs79598313 0.0995 total cholesterol in IDL (EFO:0022184)
 PMID:38448586
GWAS1006147_H GCST90301946 Apolipoprotein B levels 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 9E-21 20.046 rs79598313 0.1197 apolipoprotein B measurement (EFO:0004615)
 PMID:38448586
GWAS1006407_H GCST90302093 Cholesterol esters in small LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 2E-18 17.699 rs79598313 0.112 esterified cholesterol measurement (EFO:0008589)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
None Available GCST90301961 Omega-6 fatty acids levels 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 1E-10 10 rs79598313 0.0831 omega-6 polyunsaturated fatty acid measurement (EFO:0005680)
 PMID:38448586
None Available GCST90301993 Triglyceride levels in LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 1E-13 13 rs79598313 0.0954 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
GWAS1006594_H GCST90093015 Triglycerides to total lipids ratio in very large HDL 115,056 European ancestry individuals C 0.976798 6E-14 13.222 rs79598313 0.0967019 triglycerides:total lipids ratio (EFO:0020947)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90302091 Total Cholesterol in small LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 1E-18 18 rs79598313 0.113 total cholesterol in small LDL (EFO:0022179)
 PMID:38448586
None Available GCST90302092 Total cholesterol to total lipids ratio in small LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0298 1E-10 10 rs79598313 0.0825 cholesterol:total lipids ratio (EFO:0020943)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
GWAS1006702_H GCST90302053 Triglycerides in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 1E-12 12 rs79598313 0.0908 triglycerides in medium LDL measurement (EFO:0022322)
 PMID:38448586
GWAS1006726_H GCST90302106 Cholesterol esters in small VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 3E-14 13.523 rs79598313 0.0973 very low density lipoprotein cholesterol measurement (EFO:0008317)
esterified cholesterol measurement (EFO:0008589)
 PMID:38448586
None Available GCST90093026 Triglyceride levels in very large VLDL 115,082 European ancestry individuals C 0.976799 2E-16 15.699 rs79598313 0.107591 triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90302108 Free cholesterol in small VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 1E-15 15 rs79598313 0.1025 free cholesterol in small VLDL measurement (EFO:0022272)
 PMID:38448586
GWAS1006989_H GCST90302110 Total lipids in small VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0301 3E-15 14.523 rs79598313 0.1021 total lipids in small VLDL (EFO:0022148)
 PMID:38448586
None Available GCST90302118 Total fatty acids 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 1E-10 10 rs79598313 0.0828 fatty acid measurement (EFO:0005110)
 PMID:38448586
None Available GCST90302101 Triglycerides in small LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 2E-13 12.699 rs79598313 0.0946 triglycerides in small LDL measurement (EFO:0022323)
 PMID:38448586
GWAS1007273_H GCST90302150 Total cholesterol in very small VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 6E-11 10.222 rs79598313 0.0837 cholesterol in very small VLDL measurement (EFO:0022231)
 PMID:38448586
None Available GCST90302057 Total cholesterol in medium VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 4E-12 11.398 rs79598313 0.089 total cholesterol in medium VLDL (EFO:0022162)
 PMID:38448586
GWAS1007564_H GCST90301947 Ratio of apolipoprotein B to apolipoprotein A1 levels 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 3E-24 23.523 rs79598313 0.1301 apolipoprotein A 1 measurement (EFO:0004614)
apolipoprotein B measurement (EFO:0004615)
 PMID:38448586
None Available GCST90302071 Polyunsaturated fatty acids 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 3E-10 9.523 rs79598313 0.0811 polyunsaturated fatty acid measurement (EFO:0010733)
 PMID:38448586
None Available GCST90302074 Remnant cholesterol (non-HDL, non-LDL -cholesterol) 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 1E-16 16 rs79598313 0.1062 remnant cholesterol measurement (EFO:0010815)
 PMID:38448586
None Available GCST90301985 Triglycerides in IDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0301 1E-15 15 rs79598313 0.1038 triglycerides in IDL measurement (EFO:0022149)
 PMID:38448586
None Available GCST90092978 Triglyceride levels in small VLDL 115,082 European ancestry individuals C 0.976799 2E-16 15.699 rs79598313 0.108332 triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90302099 Phospholipids in small LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 2E-16 15.699 rs79598313 0.1055 phospholipids in small LDL measurement (EFO:0022297)
 PMID:38448586
GWAS1007879_H GCST90302075 Serum total cholesterol levels 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 4E-11 10.398 rs79598313 0.0848 total cholesterol measurement (EFO:0004574)
 PMID:38448586
GWAS1008377_H GCST90302098 Concentration of small LDL particles 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 1E-19 19 rs79598313 0.1163 low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
GWAS1008386_H GCST90301977 Cholesterol esters in IDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 9E-15 14.046 rs79598313 0.0992 esterified cholesterol measurement (EFO:0008589)
intermediate density lipoprotein measurement (EFO:0008595)
 PMID:38448586
GWAS1008644_H GCST90319904 Serum urate levels 219,768 East Asian ancestry individuals, 677,373 European ancestry individuals, 132,182 individuals T NR 2E-33 32.699 rs79598313 0.1034 urate measurement (EFO:0004531)
 PMID:38658550
None Available GCST90302051 Phospholipids in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 3E-19 18.523 rs79598313 0.1149 phospholipids in medium LDL measurement (EFO:0022183)
 PMID:38448586
None Available GCST90302048 Free cholesterol to total lipids ratio in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0302 2E-15 14.699 rs79598313 0.1037 low density lipoprotein cholesterol measurement (EFO:0004611)
free cholesterol:total lipids ratio (EFO:0020945)
 PMID:38448586
GWAS1010767_H GCST90302046 Cholesteryl esters to total lipids ratio in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0298 7E-14 13.155 rs79598313 0.0954 low density lipoprotein cholesterol measurement (EFO:0004611)
cholesteryl esters:total lipids ratio (EFO:0020944)
 PMID:38448586
None Available GCST90302015 Phospholipids in large LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 2E-16 15.699 rs79598313 0.1057 phospholipids in large LDL measurement (EFO:0022174)
 PMID:38448586
GWAS1011070_H GCST90302047 Free cholesterol in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 2E-19 18.699 rs79598313 0.1156 free cholesterol in medium LDL measurement (EFO:0022268)
 PMID:38448586
None Available GCST90302014 Concentration of large LDL particles 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 2E-18 17.699 rs79598313 0.1122 low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
None Available GCST90301979 Free cholesterol in IDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 1E-13 13 rs79598313 0.0949 free cholesterol in IDL measurement (EFO:0022181)
 PMID:38448586
GWAS1012007_H GCST90302013 Total lipids in large LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 1E-17 17 rs79598313 0.1098 total lipids in large LDL (EFO:0022163)
 PMID:38448586
GWAS1012294_H GCST90302007 Total cholesterol in large LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 2E-17 16.699 rs79598313 0.1091 total cholesterol in large LDL (EFO:0022167)
 PMID:38448586
GWAS1012307_H GCST90302049 Total lipid levels in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 8E-20 19.097 rs79598313 0.1167 low density lipoprotein cholesterol measurement (EFO:0004611)
lipid measurement (EFO:0004529)
 PMID:38448586
GWAS1012565_H GCST90301982 Concentration of IDL particles 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 6E-17 16.222 rs79598313 0.107 intermediate density lipoprotein measurement (EFO:0008595)
 PMID:38448586
GWAS1012574_H GCST90302009 Cholesterol esters in large LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 5E-18 17.302 rs79598313 0.111 cholesterol esters in large LDL measurement (EFO:0022165)
 PMID:38448586
None Available GCST90302043 Total cholesterol in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 3E-19 18.523 rs79598313 0.1149 total cholesterol in medium LDL (EFO:0022185)
 PMID:38448586
None Available GCST90302044 Total cholesterol to total lipids ratio in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0298 3E-10 9.523 rs79598313 0.08 cholesterol:total lipids ratio (EFO:0020943)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
None Available GCST90302011 Free cholesterol in large LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 2E-15 14.699 rs79598313 0.1018 free cholesterol in large LDL measurement (EFO:0022176)
 PMID:38448586
None Available GCST90302010 Cholesteryl esters to total lipids ratio in large LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0299 1E-13 13 rs79598313 0.0948 low density lipoprotein cholesterol measurement (EFO:0004611)
cholesteryl esters:total lipids ratio (EFO:0020944)
 PMID:38448586
GWAS1013137_H GCST90302045 Cholesterol esters in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 4E-19 18.398 rs79598313 0.1144 cholesterol esters in medium LDL measurement (EFO:0022186)
 PMID:38448586
GWAS1013154_H GCST90302050 Concentration of medium LDL particles 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.03 3E-20 19.523 rs79598313 0.1183 low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
None Available GCST90019494 Serum alkaline phosphatase levels 342,535 European ancestry individuals, 6,019 African ancestry individuals, 7,337 South Asian ancestry individuals T NR 1E-13 13 rs79598313 0.0587 alkaline phosphatase measurement (EFO:0004533)
 PMID:33462484
GWAS1028486_H GCST90027092 Sex hormone-binding globulin levels 158,000 British ancestry women T 0.02 4E-18 17.398 rs79598313 3.94 sex hormone-binding globulin measurement (EFO:0004696)
 PMID:34321204
GWAS1029144_H GCST90027091 Sex hormone-binding globulin levels 148,248 British ancestry men T 0.02 8E-39 38.097 rs79598313 3.37 sex hormone-binding globulin measurement (EFO:0004696)
 PMID:34321204
None Available GCST90027093 Sex hormone-binding globulin levels 104,632 British ancestry post-menopausal women T 0.02 1E-10 10 rs79598313 3.45 sex hormone-binding globulin measurement (EFO:0004696)
 PMID:34321204
None Available GCST90027094 Sex hormone-binding globulin levels 36,203 British ancestry pre-menopausal women T 0.02 3E-8 7.523 rs79598313 5.82 sex hormone-binding globulin measurement (EFO:0004696)
 PMID:34321204
None Available GCST008972 Urate levels 288,649 European ancestry individuals, 125,725 East Asian ancestry individuals, 33,671 African American individuals, 9,037 South Asian ancestry individuals, 608 Hispanic individuals T 0.0255 1E-15 15 rs79598313 0.1018 urate measurement (EFO:0004531)
 PMID:31578528
GWAS1032125_H GCST008973 Urate levels 174,111 European, East Asian, African American, South Asian and Hispanic ancestry men, 172,102 European, East Asian, African American, South Asian and Hispanic ancestry women T 0.0272 1E-7 7 rs79598313 0.0987 urate measurement (EFO:0004531)
 PMID:31578528
None Available GCST008973 Urate levels 174,111 European, East Asian, African American, South Asian and Hispanic ancestry men, 172,102 European, East Asian, African American, South Asian and Hispanic ancestry women T 0.0259 1E-7 7 rs79598313 0.1187 urate measurement (EFO:0004531)
 PMID:31578528
None Available GCST008971 Urate levels 288,649 European ancestry individuals T 0.026 9E-15 14.046 rs79598313 0.09962 urate measurement (EFO:0004531)
 PMID:31578528
None Available GCST90310294 Systolic blood pressure 1,028,980 European ancestry individuals T NR 5E-14 13.302 rs79598313 0.6038 systolic blood pressure (EFO:0006335)
 PMID:38689001
None Available GCST90132314 Coronary artery disease 181,522 European ancestry, unknown cases, 984,168 European ancestry, unknown controls T 0.024 4E-8 7.398 rs79598313 1.1 coronary artery disease (EFO:0001645)
 PMID:36474045
None Available GCST90310296 Pulse pressure 1,028,980 European ancestry individuals T NR 4E-8 7.398 rs79598313 0.3133 pulse pressure measurement (EFO:0005763)
 PMID:38689001
None Available GCST90310295 Diastolic blood pressure 1,028,980 European ancestry individuals T NR 5E-9 8.302 rs79598313 0.2912 diastolic blood pressure (EFO:0006336)
 PMID:38689001
Database Acc Id Source(s)
GWAS Catalog GCST008972 GWAS Catalog
  GCST90092874 GWAS Catalog
  GCST90092992 GWAS Catalog
  GCST90093020 GWAS Catalog
  GCST90301985 GWAS Catalog
  GCST90302108 GWAS Catalog

RGD Curation Notes
Note Type Note Reference