GWAS762907_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS762907_H (self reported educational attainment QTL GWAS762907 (human)) Homo sapiens

Symbol: GWAS762907_H
Name: self reported educational attainment QTL GWAS762907 (human)
RGD ID: 407113931
Trait: self reported educational attainment
LOD Score: Not Available
P Value: 4.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38120,214,877 - 20,214,878RGD_MAPPER_PIPELINEGRCh38
GRCh37120,541,370 - 20,541,371RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS762907_HHumanself reported educational attainment  IAGPrs10799615405850206 GWAS_CATALOGPMID:30038396
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs10799615)
Human AssemblyChrPosition (strand)Source
GRCh38120,214,877 - 20,214,878RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human
407113931GWAS762907_Hself reported educational attainment QTL GWAS762907 (human)4e-08self reported educational attainment12021487720214878Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS762907_H GCST006442 Educational attainment (years of education) up to 1,131,881 European ancestry individuals A 0.2525 4E-8 7.398 rs10799615 0.0089 self reported educational attainment (EFO:0004784)
 PMID:30038396
Database Acc Id Source(s)
GWAS Catalog GCST006442 GWAS Catalog

RGD Curation Notes
Note Type Note Reference