GWAS731001_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS731001_H (1-(1-enyl-oleoyl)-GPC (P-18:1) measurement QTL GWAS731001 (human)) Homo sapiens

Symbol: GWAS731001_H
Name: 1-(1-enyl-oleoyl)-GPC (P-18:1) measurement QTL GWAS731001 (human)
RGD ID: 407082025
Trait: 1-(1-enyl-oleoyl)-GPC (P-18:1) measurement
LOD Score: Not Available
P Value: 1.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38986,336,558 - 86,336,559RGD_MAPPER_PIPELINEGRCh38
GRCh37988,951,473 - 88,951,474RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS731001_HHuman1-(1-enyl-oleoyl)-GPC (P-18:1) measurement  IAGPrs77206558405850206 GWAS_CATALOGPMID:36357675
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1344359TUT7terminal uridylyl transferase 798628773386354410Human

Position Markers

Peak: (rs77206558)
Human AssemblyChrPosition (strand)Source
GRCh38986,336,558 - 86,336,559RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407082025GWAS731001_H1-(1-enyl-oleoyl)-GPC (P-18:1) measurement QTL GWAS731001 (human)0.0000011-(1-enyl-oleoyl)-GPC (P-18:1) measurement98633655886336559Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS731001_H GCST90244848 1-(1-enyl-oleoyl)-GPC (p-18:1) levels 14,296 European ancestry individuals T 0.9676 0.000001 6 rs77206558 0.1545895 1-(1-enyl-oleoyl)-GPC (P-18:1) measurement (EFO:0800324)
 PMID:36357675
Database Acc Id Source(s)
GWAS Catalog GCST90244848 GWAS Catalog

RGD Curation Notes
Note Type Note Reference