GWAS665202_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS665202_H (body height QTL GWAS665202 (human)) Homo sapiens

Symbol: GWAS665202_H
Name: body height QTL GWAS665202 (human)
RGD ID: 407016226
Trait: body height   (VT:0001253)    
Measurement Type: body height   (CMO:0000106)    
LOD Score: Not Available
P Value: 3.0E-14
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38986,320,473 - 86,320,474RGD_MAPPER_PIPELINEGRCh38
GRCh37988,935,388 - 88,935,389RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS665202_HHumanbody height  IAGPrs700764405850206Based on the EFO term IDGWAS_CATALOGPMID:36224396

Vertebrate Trait
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS665202_HHumanbody height  IAGPrs700764405850206Based on the EFO term IDGWAS_CATALOGPMID:36224396

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS665202_HHumanbody height  IAGPrs700764405850206 GWAS_CATALOGPMID:36224396
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement
body height  (IAGP)

Vertebrate Trait
body height  (IAGP)

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1344359TUT7terminal uridylyl transferase 798628773386354410Human

Position Markers

Peak: (rs700764)
Human AssemblyChrPosition (strand)Source
GRCh38986,320,473 - 86,320,474RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407016226GWAS665202_Hbody height QTL GWAS665202 (human)3e-14body height (VT:0001253)body height (CMO:0000106)98632047386320474Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS665202_H GCST90245844 Height 455,180 Hispanic or Latin American individuals C 0.2622 3E-14 13.523 rs700764 0.0186 body height (EFO:0004339)
 PMID:36224396
Database Acc Id Source(s)
GWAS Catalog GCST90245844 GWAS Catalog

RGD Curation Notes
Note Type Note Reference