GWAS665032_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS665032_H (body mass index QTL GWAS665032 (human)) Homo sapiens

Symbol: GWAS665032_H
Name: body mass index QTL GWAS665032 (human)
RGD ID: 407016056
Trait: body mass index
Measurement Type: body mass index (BMI)   (CMO:0000105)    
LOD Score: Not Available
P Value: 3.0E-9
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38986,300,651 - 86,300,652RGD_MAPPER_PIPELINEGRCh38
GRCh37988,915,566 - 88,915,567RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS665032_HHumanbody mass index (BMI)  IAGPrs4877313405850206Based on the EFO term IDGWAS_CATALOGPMID:31669095

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS665032_HHumanbody mass index  IAGPrs4877313405850206 GWAS_CATALOGPMID:31669095
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1344359TUT7terminal uridylyl transferase 798628773386354410Human

Position Markers

Peak: (rs4877313)
Human AssemblyChrPosition (strand)Source
GRCh38986,300,651 - 86,300,652RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407016056GWAS665032_Hbody mass index QTL GWAS665032 (human)3e-09body mass indexbody mass index (BMI) (CMO:0000105)98630065186300652Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS665032_H GCST009871 Body mass index 457,822 European ancestry individuals ? NR 3E-9 8.523 rs4877313 N/A body mass index (EFO:0004340)
 PMID:31669095
None Available GCST90301650 Body mass index 441,761 European ancestry individuals A NR 3E-9 8.523 rs4877313 0.0136063 body mass index (EFO:0004340)
 PMID:37280435
Database Acc Id Source(s)
GWAS Catalog GCST009871 GWAS Catalog
  GCST90301650 GWAS Catalog

RGD Curation Notes
Note Type Note Reference