GWAS642291_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS642291_H (BMI-adjusted waist circumference QTL GWAS642291 (human)) Homo sapiens

Symbol: GWAS642291_H
Name: BMI-adjusted waist circumference QTL GWAS642291 (human)
RGD ID: 406993315
Trait: BMI-adjusted waist circumference
LOD Score: Not Available
P Value: 2.0E-9
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh382232,316,447 - 232,316,448RGD_MAPPER_PIPELINEGRCh38
GRCh372233,181,157 - 233,181,158RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS642291_HHumanBMI-adjusted waist circumference  IAGPrs116341888405850206 GWAS_CATALOGPMID:31669095
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1604754DIS3L2DIS3 like 3'-5' exoribonuclease 22231961713232344350Human

Position Markers

Peak: (rs116341888)
Human AssemblyChrPosition (strand)Source
GRCh382232,316,447 - 232,316,448RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
406993315GWAS642291_HBMI-adjusted waist circumference QTL GWAS642291 (human)2e-09BMI-adjusted waist circumference2232316447232316448Human
2289332BW376_HBody weight QTL 376 (human)1.870.00168Body fat amountabdominal2213765566239765566Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS642291_H GCST009867 Waist circumference adjusted for body mass index 457,690 European ancestry individuals ? NR 2E-9 8.699 rs116341888 N/A BMI-adjusted waist circumference (EFO:0007789)
 PMID:31669095
Database Acc Id Source(s)
GWAS Catalog GCST009867 GWAS Catalog

RGD Curation Notes
Note Type Note Reference