GWAS624758_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS624758_H (forced expiratory volume QTL GWAS624758 (human)) Homo sapiens

Symbol: GWAS624758_H
Name: forced expiratory volume QTL GWAS624758 (human)
RGD ID: 406975782
Trait: forced expiratory volume
Measurement Type: forced expiratory volume   (CMO:0000254)    
LOD Score: Not Available
P Value: 9.0E-17
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381573,950,905 - 73,950,906RGD_MAPPER_PIPELINEGRCh38
GRCh371574,243,246 - 74,243,247RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS624758_HHumanforced expiratory volume  IAGPrs12437465405850206Based on the EFO term IDGWAS_CATALOGPMID:36641522

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS624758_HHumanforced expiratory volume  IAGPrs12437465405850206 GWAS_CATALOGPMID:36641522
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1318705LOXL1lysyl oxidase like 1157392646273952136Human

Position Markers

Peak: (rs12437465)
Human AssemblyChrPosition (strand)Source
GRCh381573,950,905 - 73,950,906RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
406975782GWAS624758_Hforced expiratory volume QTL GWAS624758 (human)9e-17forced expiratory volumeforced expiratory volume (CMO:0000254)157395090573950906Human
407035755GWAS684731_Hvital capacity QTL GWAS684731 (human)6e-27vital capacity157395090573950906Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS624758_H GCST90270081 FEV1 383,471 European ancestry individuals ? NR 9E-17 16.046 rs12437465 N/A forced expiratory volume (EFO:0004314)
 PMID:36641522
GWAS684731_H GCST90270083 FVC 383,471 European ancestry individuals ? NR 6E-27 26.222 rs12437465 N/A vital capacity (EFO:0004312)
 PMID:36641522
Database Acc Id Source(s)
GWAS Catalog GCST90270081 GWAS Catalog

RGD Curation Notes
Note Type Note Reference