GWAS617516_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS617516_H (high density lipoprotein cholesterol measurement QTL GWAS617516 (human)) Homo sapiens

Symbol: GWAS617516_H
Name: high density lipoprotein cholesterol measurement QTL GWAS617516 (human)
RGD ID: 406968540
Trait: blood HDL cholesterol amount   (VT:0000184)    
Measurement Type: blood high density lipoprotein cholesterol level   (CMO:0000052)    
LOD Score: Not Available
P Value: 1.0E-16
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38915,305,380 - 15,305,381RGD_MAPPER_PIPELINEGRCh38
GRCh37915,305,378 - 15,305,379RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS617516_HHumanblood high density lipoprotein cholesterol level  IAGPrs581080405850206Based on the EFO term IDGWAS_CATALOGPMID:28334899

Vertebrate Trait
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS617516_HHumanblood HDL cholesterol amount  IAGPrs581080405850206Based on the EFO term IDGWAS_CATALOGPMID:28334899

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS617516_HHumanhigh density lipoprotein cholesterol measurement  IAGPrs581080405850206 GWAS_CATALOGPMID:28334899
Experimental Data Annotations     Click to see Annotation Detail View

Vertebrate Trait

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1314048TTC39Btetratricopeptide repeat domain 39B91516362215307216Human

Position Markers

Peak: (rs581080)
Human AssemblyChrPosition (strand)Source
GRCh38915,305,380 - 15,305,381RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
597263513GWAS1359587_Htriglyceride measurement, high density lipoprotein cholesterol measurement QTL GWAS1359587 (human)1e-18triglyceride measurement, high density lipoprotein cholesterol measurement91530538015305381Human
407340998GWAS989974_Htriglyceride measurement, high density lipoprotein cholesterol measurement QTL GWAS989974 (human)1e-18triglyceride measurement, high density lipoprotein cholesterol measurement91530538015305381Human
628414832GWAS2323061_Hhigh density lipoprotein cholesterol measurement QTL GWAS2323061 (human)2e-09blood HDL cholesterol amount (VT:0000184)blood high density lipoprotein cholesterol level (CMO:0000052)91530538015305381Human
407315266GWAS964242_Hhigh density lipoprotein cholesterol measurement QTL GWAS964242 (human)2e-32high density lipoprotein cholesterol measurement91530538015305381Human
628411890GWAS2320119_Hapolipoprotein B measurement QTL GWAS2320119 (human)7e-12apolipoprotein B measurementblood apoliprotein B level (CMO:0000522)91530538015305381Human
628583409GWAS2491638_Htriglyceride measurement, high density lipoprotein cholesterol measurement QTL GWAS2491638 (human)2e-15blood HDL cholesterol amount (VT:0000184)blood high density lipoprotein cholesterol level (CMO:0000052)91530538015305381Human
407197634GWAS846610_Hapolipoprotein B measurement QTL GWAS846610 (human)4e-10apolipoprotein B measurement91530538015305381Human
406931019GWAS579995_Hapolipoprotein B measurement QTL GWAS579995 (human)7e-12apolipoprotein B measurement91530538015305381Human
628586876GWAS2495105_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS2495105 (human)2e-10blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)91530538015305381Human
628781425GWAS2689654_Hapolipoprotein B measurement QTL GWAS2689654 (human)4e-10apolipoprotein B measurementblood apoliprotein B level (CMO:0000522)91530538015305381Human
628977649GWAS2885878_Homega-6 polyunsaturated fatty acid measurement QTL GWAS2885878 (human)9e-09fatty acid amount (VT:0010046)91530538015305381Human
628782455GWAS2690684_Hapolipoprotein A 1 measurement QTL GWAS2690684 (human)5e-44apolipoprotein A 1 measurementblood apolipoprotein AI level (CMO:0000520)91530538015305381Human
628979440GWAS2887669_Hlinoleic acid measurement QTL GWAS2887669 (human)4e-09fatty acid amount (VT:0010046)blood free fatty acids level (CMO:0000117)91530538015305381Human
407112138GWAS761114_Htriglycerides in large LDL measurement QTL GWAS761114 (human)7e-11triglyceride measurement, low density lipoprotein cholesterol measurement91530538015305381Human
407261384GWAS910360_Htotal cholesterol measurement QTL GWAS910360 (human)2e-17total cholesterol measurement91530538015305381Human
407193418GWAS842394_Htriglyceride measurement, high density lipoprotein cholesterol measurement QTL GWAS842394 (human)2e-15triglyceride measurement, high density lipoprotein cholesterol measurement91530538015305381Human
407124182GWAS773158_Hphospholipids:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS773158 (human)6e-13phospholipids:total lipids ratio, high density lipoprotein cholesterol measurement91530538015305381Human
628876143GWAS2784372_Hfree cholesterol to total lipids in very large HDL percentage QTL GWAS2784372 (human)2e-13blood HDL cholesterol amount (VT:0000184)91530538015305381Human
2302773MAMTS18_HMammary tumor susceptibility QTL 18 (human)0.039Mammary tumor susceptibility9528914931289149Human
597174159GWAS1270233_Hfree cholesterol to total lipids in very large HDL percentage QTL GWAS1270233 (human)2e-13free cholesterol to total lipids in very large HDL percentage 91530538015305381Human
628542433GWAS2450662_Htriglycerides in medium LDL measurement QTL GWAS2450662 (human)5e-13fatty acid amount (VT:0010046)blood free fatty acids level (CMO:0000117)91530538015305381Human
628789472GWAS2697701_Htotal cholesterol measurement QTL GWAS2697701 (human)2e-17blood cholesterol amount (VT:0000180)blood total cholesterol level (CMO:0000051)91530538015305381Human
2293433PRSTS223_HProstate tumor susceptibility QTL 223 (human)1.6Prostate tumor susceptibility9528914931289149Human
597188995GWAS1285069_Htriglycerides in very large HDL measurement QTL GWAS1285069 (human)5e-14triglycerides in very large HDL measurement 91530538015305381Human
597032585GWAS1128659_Hhigh density lipoprotein cholesterol measurement QTL GWAS1128659 (human)2e-09high density lipoprotein cholesterol measurement91530538015305381Human
406968540GWAS617516_Hhigh density lipoprotein cholesterol measurement QTL GWAS617516 (human)1e-16blood HDL cholesterol amount (VT:0000184)blood high density lipoprotein cholesterol level (CMO:0000052)91530538015305381Human
596949641GWAS1069160_Htotal cholesterol measurement QTL GWAS1069160 (human)2e-12total cholesterol measurement91530538015305381Human
597156745GWAS1252819_Htriglycerides:total lipids ratio, low density lipoprotein cholesterol measurement QTL GWAS1252819 (human)4e-11triglycerides:total lipids ratio, low density lipoprotein cholesterol measurement91530538015305381Human
407128801GWAS777777_Htriglycerides in small LDL measurement QTL GWAS777777 (human)1e-09triglycerides in small LDL measurement 91530538015305381Human
407285230GWAS934206_Htriglycerides:total lipids ratio, low density lipoprotein cholesterol measurement QTL GWAS934206 (human)4e-11triglycerides:total lipids ratio, low density lipoprotein cholesterol measurement91530538015305381Human
628601311GWAS2509540_Htriglyceride measurement, high density lipoprotein cholesterol measurement QTL GWAS2509540 (human)1e-18blood HDL cholesterol amount (VT:0000184)blood high density lipoprotein cholesterol level (CMO:0000052)91530538015305381Human
616504597GWAS1901180_Hlevel of receptor-type tyrosine-protein phosphatase F in blood QTL GWAS1901180 (human)9e-16level of receptor-type tyrosine-protein phosphatase F in blood91530538015305381Human
628584540GWAS2492769_Htriglycerides:total lipids ratio, low density lipoprotein cholesterol measurement QTL GWAS2492769 (human)4e-11blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)91530538015305381Human
628739669GWAS2647898_Hhigh density lipoprotein cholesterol measurement QTL GWAS2647898 (human)2e-32blood HDL cholesterol amount (VT:0000184)blood high density lipoprotein cholesterol level (CMO:0000052)91530538015305381Human
407282667GWAS931643_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS931643 (human)2e-10triglyceride measurement, low density lipoprotein cholesterol measurement91530538015305381Human
597174453GWAS1270527_Hphosphatidylcholine measurement QTL GWAS1270527 (human)6e-10phosphatidylcholine measurement91530538015305381Human
597152442GWAS1248516_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS1248516 (human)2e-10triglyceride measurement, low density lipoprotein cholesterol measurement91530538015305381Human
597150008GWAS1246082_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS1246082 (human)7e-11triglycerides in large LDL measurement 91530538015305381Human
628587591GWAS2495820_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS2495820 (human)7e-11blood LDL triglyceride amount (VT:0010699)blood low density lipoprotein cholesterol level (CMO:0000053)91530538015305381Human
597287208GWAS1383282_Htriglycerides in small LDL measurement QTL GWAS1383282 (human)1e-09triglycerides in small LDL measurement 91530538015305381Human
407048823GWAS697799_Hhigh density lipoprotein cholesterol measurement QTL GWAS697799 (human)1e-19blood HDL cholesterol amount (VT:0000184)blood high density lipoprotein cholesterol level (CMO:0000052)91530538015305381Human
617273212GWAS2209988_Homega-6 polyunsaturated fatty acid measurement QTL GWAS2209988 (human)2e-08omega-6 polyunsaturated fatty acid measurement91530538015305381Human
628759106GWAS2667335_Hphospholipids:total lipids ratio QTL GWAS2667335 (human)5e-40phospholipids:total lipids ratio91530538015305381Human
628410829GWAS2319058_Htriglyceride measurement QTL GWAS2319058 (human)1e-11blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)91530538015305381Human
628541263GWAS2449492_Hphospholipids:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS2449492 (human)6e-13blood HDL cholesterol amount (VT:0000184)blood high density lipoprotein cholesterol level (CMO:0000052)91530538015305381Human
2293400PRSTS224_HProstate tumor susceptibility QTL 224 (human)1.62Prostate tumor susceptibility9528914931289149Human
407115399GWAS764375_Hhigh density lipoprotein cholesterol measurement QTL GWAS764375 (human)2e-09high density lipoprotein cholesterol measurement91530538015305381Human
597245021GWAS1341095_Hhigh density lipoprotein cholesterol measurement QTL GWAS1341095 (human)2e-32high density lipoprotein cholesterol measurement91530538015305381Human
597288541GWAS1384615_Hphospholipids:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS1384615 (human)6e-13phospholipids:total lipids ratio, high density lipoprotein cholesterol measurement91530538015305381Human
628764479GWAS2672708_Htriglycerides in very large HDL measurement QTL GWAS2672708 (human)5e-14blood HDL triglyceride amount (VT:0010698)91530538015305381Human
407025540GWAS674516_Hhigh density lipoprotein cholesterol measurement QTL GWAS674516 (human)1e-13blood cholesterol amount (VT:0000180)blood total cholesterol level (CMO:0000051)91530538015305381Human
597034207GWAS1130281_Htriglyceride measurement QTL GWAS1130281 (human)1e-11triglyceride measurement, low density lipoprotein cholesterol measurement91530538015305381Human
406885514GWAS534490_Hhigh density lipoprotein cholesterol measurement QTL GWAS534490 (human)6e-11high density lipoprotein cholesterol measurement91530538015305381Human
406885515GWAS534491_Hhigh density lipoprotein cholesterol measurement QTL GWAS534491 (human)2e-12total cholesterol measurement91530538015305381Human
597185620GWAS1281694_Hphospholipids:total lipids ratio QTL GWAS1281694 (human)5e-40phospholipids:total lipids ratio91530538015305381Human
597249366GWAS1345440_Hapolipoprotein A 1 measurement QTL GWAS1345440 (human)5e-44apolipoprotein A 1 measurement91530538015305381Human
597256523GWAS1352597_Htotal cholesterol measurement QTL GWAS1352597 (human)2e-17total cholesterol measurement91530538015305381Human
407099415GWAS748391_Hphospholipids:total lipids ratio QTL GWAS748391 (human)5e-40phospholipids:total lipids ratio91530538015305381Human
407247891GWAS896867_Hapolipoprotein A 1 measurement QTL GWAS896867 (human)5e-44apolipoprotein A 1 measurement91530538015305381Human
407140499GWAS789475_Htriglycerides in medium LDL measurement QTL GWAS789475 (human)5e-13triglycerides in medium LDL measurement 91530538015305381Human
628542625GWAS2450854_Htriglycerides in small LDL measurement QTL GWAS2450854 (human)1e-09blood LDL triglyceride amount (VT:0010699)91530538015305381Human
617281693GWAS2218469_Hlinoleic acid measurement QTL GWAS2218469 (human)4e-09linoleic acid measurement91530538015305381Human
2315898GLUCO191_HGlucose level QTL 191 (human)1.83Glucose level9528914931289149Human
616489319GWAS1885902_Hlevel of phosphatidylcholine QTL GWAS1885902 (human)6e-10level of phosphatidylcholine91530538015305381Human
407119518GWAS768494_Htriglycerides in very large HDL measurement QTL GWAS768494 (human)5e-14triglycerides in very large HDL measurement 91530538015305381Human
596953930GWAS1073449_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS1073449 (human)1e-11triglyceride measurement, low density lipoprotein cholesterol measurement91530538015305381Human
628981539GWAS2889768_Homega-6 polyunsaturated fatty acid measurement QTL GWAS2889768 (human)2e-08fatty acid amount (VT:0010046)91530538015305381Human
406915872GWAS564848_Htriglyceride measurement QTL GWAS564848 (human)1e-11triglyceride measurement, low density lipoprotein cholesterol measurement91530538015305381Human
626461108GWAS2275041_Htriglyceride measurement QTL GWAS2275041 (human)6e-12triglyceride measurement91530538015305381Human
628553746GWAS2461975_Hlevel of receptor-type tyrosine-protein phosphatase F in blood QTL GWAS2461975 (human)9e-16level of receptor-type tyrosine-protein phosphatase F in blood91530538015305381Human
1357299AASTH47_HAllergic/atopic asthma related QTL 47 (human)0.00028Reversible airflow obstruction9528914931289149Human
407086116GWAS735092_Hfree cholesterol to total lipids in very large HDL percentage QTL GWAS735092 (human)2e-13free cholesterol to total lipids in very large HDL percentage 91530538015305381Human
628934299GWAS2842528_Htriglyceride measurement QTL GWAS2842528 (human)6e-12triglyceride amount (VT:0000187)blood triglyceride level (CMO:0000118)91530538015305381Human
407024939GWAS673915_Htotal cholesterol measurement QTL GWAS673915 (human)3e-09blood cholesterol amount (VT:0000180)blood total cholesterol level (CMO:0000051)91530538015305381Human
597153149GWAS1249223_Htriglyceride measurement, high density lipoprotein cholesterol measurement QTL GWAS1249223 (human)2e-15triglyceride measurement, high density lipoprotein cholesterol measurement91530538015305381Human
617268256GWAS2205032_Hlinoleic acid measurement QTL GWAS2205032 (human)5e-13triglycerides in medium LDL measurement 91530538015305381Human
628760593GWAS2668822_Hlevel of phosphatidylcholine QTL GWAS2668822 (human)6e-10level of phosphatidylcholine91530538015305381Human
407039277GWAS688253_Hphosphatidylcholine measurement QTL GWAS688253 (human)6e-10phosphatidylcholine measurement91530538015305381Human
597222647GWAS1318721_Hapolipoprotein B measurement QTL GWAS1318721 (human)4e-10apolipoprotein B measurement91530538015305381Human
1643245BW137_HBody weight QTL 137 (human)2.28Body weight9528914931289149Human
597287009GWAS1383083_Htriglycerides in medium LDL measurement QTL GWAS1383083 (human)5e-13triglycerides in medium LDL measurement 91530538015305381Human
597024495GWAS1120569_Hhigh density lipoprotein cholesterol measurement QTL GWAS1120569 (human)2e-12blood cholesterol amount (VT:0000180)blood total cholesterol level (CMO:0000051)91530538015305381Human
617274544GWAS2211320_Homega-6 polyunsaturated fatty acid measurement QTL GWAS2211320 (human)9e-09omega-6 polyunsaturated fatty acid measurement91530538015305381Human
597024494GWAS1120568_Hhigh density lipoprotein cholesterol measurement QTL GWAS1120568 (human)6e-11blood HDL cholesterol amount (VT:0000184)blood high density lipoprotein cholesterol level (CMO:0000052)91530538015305381Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS1120568_H GCST007140 High density lipoprotein cholesterol levels 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals G 0.182 6E-11 10.222 rs581080 0.033 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:29507422
GWAS1120569_H GCST007140 High density lipoprotein cholesterol levels 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals G NR 2E-12 11.699 rs581080 0.033 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:29507422
GWAS2319058_H GCST010244 Triglyceride levels 441,016 European ancestry individuals G 0.180992 1E-11 11 rs581080 0.0175184 triglyceride measurement (EFO:0004530)
 PMID:32203549
GWAS2320119_H GCST010243 Apolipoprotein B levels 439,214 European ancestry individuals G 0.181009 7E-12 11.155 rs581080 0.0185605 apolipoprotein B measurement (EFO:0004615)
 PMID:32203549
GWAS2323061_H GCST008685 HDL cholesterol levels up to 23,761 African ancestry individuals, 13,171 Asian ancestry individuals, up to 90,272 European ancestry individuals, 6,620 Hispanic individuals C 0.8159 2E-9 8.699 rs581080 0.0099 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:30926973
GWAS1069160_H GCST004235 Total cholesterol levels 32,576 East Asian ancestry individuals, 187,365 European ancestry individuals C 0.821 2E-12 11.699 rs581080 0.0377 total cholesterol measurement (EFO:0004574)
 PMID:28334899
GWAS617516_H GCST004232 HDL cholesterol levels 34,930 East Asian ancestry individuals, 187,167 European ancestry individuals C 0.821 1E-16 16 rs581080 0.0419 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:28334899
GWAS673915_H GCST000760 Cholesterol, total 100,184 European ancestry individuals G 0.18 3E-9 8.523 rs581080 1.57 total cholesterol measurement (EFO:0004574)
 PMID:20686565
GWAS674516_H GCST000755 HDL cholesterol 99,900 European ancestry individuals C 0.14 1E-13 13 rs581080 0.72 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:20686565
None Available GCST002221 Cholesterol, total 94,595 European ancestry individuals G 0.21 1E-13 13 rs581080 0.038 total cholesterol measurement (EFO:0004574)
 PMID:24097068
GWAS697799_H GCST002223 HDL cholesterol 94,595 European ancestry individuals G 0.21 1E-19 19 rs581080 0.042 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:24097068
None Available GCST90301993 Triglyceride levels in LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals C 0.8221 1E-11 11 rs581080 0.0363 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
GWAS2449492_H GCST90302088 Phospholipids to total lipids ratio in small HDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals C 0.8217 6E-13 12.222 rs581080 0.0381 phospholipids:total lipids ratio (EFO:0020946)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:38448586
GWAS2450662_H GCST90302053 Triglycerides in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals C 0.822 5E-13 12.302 rs581080 0.0383 triglycerides in medium LDL measurement (EFO:0022322)
 PMID:38448586
GWAS2450854_H GCST90302101 Triglycerides in small LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals C 0.8222 1E-9 9 rs581080 0.0325 triglycerides in small LDL measurement (EFO:0022323)
 PMID:38448586
GWAS2461975_H GCST90470381 PTPRF protein levels 47,745 European ancestry individuals C 0.82029532 9E-16 15.046 rs581080 0.054683845 level of receptor-type tyrosine-protein phosphatase F in blood (OBA:2051659)
 PMID:39789286
GWAS2491638_H GCST90092854 Triglyceride levels in large HDL 115,082 European ancestry individuals G 0.179607 2E-15 14.699 rs581080 0.0407804 triglyceride measurement (EFO:0004530)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS2492769_H GCST90092915 Triglycerides to total lipids ratio in medium LDL 115,082 European ancestry individuals G 0.179607 4E-11 10.398 rs581080 0.0347682 triglycerides:total lipids ratio (EFO:0020947)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
None Available GCST90092914 Triglyceride levels in medium LDL 115,082 European ancestry individuals G 0.179607 1E-11 11 rs581080 0.0355832 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS2495105_H GCST90092890 Triglyceride levels in LDL 115,082 European ancestry individuals G 0.179607 2E-10 9.699 rs581080 0.0335824 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS2495820_H GCST90092866 Triglyceride levels in large LDL 115,082 European ancestry individuals G 0.179607 7E-11 10.155 rs581080 0.0343479 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS2509540_H GCST90093014 Triglyceride levels in very large HDL 115,082 European ancestry individuals G 0.179607 1E-18 18 rs581080 0.0461884 triglyceride measurement (EFO:0004530)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90302017 Triglycerides in large LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals C 0.822 7E-11 10.155 rs581080 0.0349 triglycerides in large LDL measurement (EFO:0022319)
 PMID:38448586
GWAS2647898_H GCST90019510 High density lipoprotein cholesterol levels 313,372 European ancestry individuals, 5,573 African ancestry individuals, 6,689 South Asian ancestry individuals C NR 2E-32 31.699 rs581080 0.038 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:33462484
GWAS2667335_H GCST90269711 Phospholipids to total lipids in large LDL percentage (UKB data field 23614) 88,329 European ancestry individuals G 0.179313 5E-40 39.302 rs581080 0.0813378 phospholipids:total lipids ratio (EFO:0020946)
 PMID:36764567
GWAS2668822_H GCST90269534 Phosphatidylcholines levels (UKB data field 23437) 88,268 European ancestry individuals G 0.179301 6E-10 9.222 rs581080 0.0357945 level of phosphatidylcholine (OBA:2040179)
 PMID:36764567
GWAS2672708_H GCST90269654 Triglycerides in very large HDL (UKB data field 23557) 88,329 European ancestry individuals G 0.179313 5E-14 13.302 rs581080 0.0454363 triglycerides in very large HDL measurement (EFO:0022324)
 PMID:36764567
GWAS2689654_H GCST90019496 Apolipoprotein B levels 340,860 European ancestry individuals, 5,962 African ancestry individuals, 7,275 South Asian ancestry individuals C NR 4E-10 9.398 rs581080 0.0193 apolipoprotein B measurement (EFO:0004615)
 PMID:33462484
GWAS2690684_H GCST90019495 Apolipoprotein A1 levels 311,601 European ancestry individuals, 5,550 African ancestry individuals, 6,682 South Asian ancestry individuals C NR 5E-44 43.302 rs581080 0.0447 apolipoprotein A 1 measurement (EFO:0004614)
 PMID:33462484
GWAS2697701_H GCST90019501 Total cholesterol levels 342,508 European ancestry individuals, 6,014 African ancestry individuals, 7,336 South Asian ancestry individuals C NR 2E-17 16.699 rs581080 0.0261 total cholesterol measurement (EFO:0004574)
 PMID:33462484
GWAS2784372_H GCST90269729 Free cholesterol to total lipids in very large HDL percentage (UKB data field 23632) 88,307 European ancestry individuals G 0.179295 2E-13 12.699 rs581080 0.04087 free cholesterol to total lipids in very large HDL percentage (EFO:0022288)
 PMID:36764567
None Available GCST90502012 Linoleic acid levels 239,268 European ancestry individuals G NR 5E-13 12.302 rs581080 N/A linoleic acid measurement (EFO:0006807)
 PMID:40545721
GWAS2842528_H GCST90662893 Triglyceride levels 507,850 East Asian ancestry individuals, 420,829 European ancestry individuals C NR 6E-12 11.222 rs581080 0.0168 triglyceride measurement (EFO:0004530)
 PMID:40436827
GWAS2885878_H GCST90502103 Omega-6 fatty acid levels 239,268 European ancestry individuals G NR 9E-9 8.046 rs581080 N/A omega-6 polyunsaturated fatty acid measurement (EFO:0005680)
 PMID:40545721
GWAS2887669_H GCST90502311 Linoleic acid levels 110,346 European ancestry males G NR 4E-9 8.398 rs581080 N/A linoleic acid measurement (EFO:0006807)
 PMID:40545721
GWAS2889768_H GCST90502519 Omega-6 fatty acid levels 110,346 European ancestry males G NR 2E-8 7.699 rs581080 N/A omega-6 polyunsaturated fatty acid measurement (EFO:0005680)
 PMID:40545721
Database Acc Id Source(s)
GWAS Catalog GCST004232 GWAS Catalog

RGD Curation Notes
Note Type Note Reference