Hrsq4_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Hrsq4_m (host response to SARS QTL 4, vascular cuffing (mouse)) Mus musculus

Symbol: Hrsq4_m
Name: host response to SARS QTL 4, vascular cuffing (mouse)
RGD ID: 25671382
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm391352,881,651 - 54,992,738MOUSEQTLGRCm39
GRCm381352,727,615 - 54,844,925MOUSEQTLGRCm38
cM Map13syntenicMOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



References

References - curated
# Reference Title Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
Additional References at PubMed
PMID:26452100  


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1612880BB123696expressed sequence BB123696135288340652911241Mouse
401705580LOC131385272STARR-seq mESC enhancer starr_34551135291809752921109Mouse
9637492Gm33315predicted gene, 33315135298311452999351Mouse
1314502AuhAU RNA binding protein/enoyl-coenzyme A hydratase135298915553083742Mouse
401704623LOC131385273STARR-seq mESC enhancer starr_34553135306476953065695Mouse
401839279LOC132442992STARR-positive B cell enhancer ABC_E3081135306857853068879Mouse
401839104LOC132442993STARR-positive B cell enhancer mm9_chr13:53024873-53025174135308354053083841Mouse
401709359LOC131385274STARR-seq mESC enhancer starr_34554135310273953104163Mouse
10022667Gm40950predicted gene, 40950135310843753121161Mouse
732632Nfil3nuclear factor, interleukin 3, regulated135312124553136914Mouse
401833622LOC132442994STARR-positive B cell enhancer ABC_E4070135313687753137178Mouse
9667459Gm33424predicted gene, 33424135314000153172525Mouse
401711364LOC131385275STARR-seq mESC enhancer starr_34555135315226253153527Mouse
9663249Gm33519predicted gene, 33519135316212653172457Mouse
1313208Ror2receptor tyrosine kinase-like orphan receptor 2135326335353440160Mouse
401836277LOC132442995STARR-positive B cell enhancer mm9_chr13:53204966-53205267135326363353263934Mouse
401715038LOC131385276STARR-seq mESC enhancer starr_34558135329288753295312Mouse
15017763Gm52058predicted gene, 52058135332375753327356Mouse
401710473LOC131385277STARR-seq mESC enhancer starr_34562135333762353339185Mouse
401705080LOC131385278STARR-seq mESC enhancer starr_34566135338733153391255Mouse
9604206Gm33574predicted gene, 33574135344032453448071Mouse
9642493Gm33631predicted gene, 33631135346270853463786Mouse
1315337Sptlc1serine palmitoyltransferase, long chain base subunit 1135348678453531401Mouse
401704649LOC131385279STARR-seq mESC enhancer starr_34568135351905253519750Mouse
401837887LOC132442996STARR-positive B cell enhancer mm9_chr13:53472671-53472972135353133853531639Mouse
2308110Gm2762predicted gene 2762135354772553609666Mouse
10008006Gm38564predicted gene, 38564135356999853573382Mouse
401715876LOC131385280STARR-seq mESC enhancer starr_34569135361484153616776Mouse
9668427Gm33763predicted gene, 33763135361539153636009Mouse
10921Msx2msh homeobox 2135362091753626816Mouse
9595544Gm33873predicted gene, 33873135363666053659774Mouse
10013153Gm40952predicted gene, 40952135365589353658422Mouse
9614922Gm34022predicted gene, 34022135366084553687309Mouse
401701261LOC131385281STARR-seq mESC enhancer starr_34573135366822253669795Mouse
1614730Gm5449predicted pseudogene 5449135367970753680168Mouse
401702031LOC131385282STARR-seq mESC enhancer starr_34575135373337753734798Mouse
16106739530014B07RikRIKEN cDNA 9530014B07 gene135378992853793237Mouse
16079864930555G21RikRIKEN cDNA 4930555G21 gene135380262153804117Mouse
9606376Gm34278predicted gene, 34278135383573953854510Mouse
9614722Gm34332predicted gene, 34332135384272653844387Mouse
9615203Gm34439predicted gene, 34439135390217153941774Mouse
401706310LOC131385283STARR-seq mESC enhancer starr_34577135393037453932743Mouse
10027973Gm40954predicted gene, 40954135399331754004124Mouse
5142576Gm18974predicted gene, 18974135404257054043153Mouse
11082103E130119H09RikRIKEN cDNA E130119H09 gene135406627554069760Mouse
9651853Gm34557predicted gene, 34557135408700254089302Mouse
10485Drd1dopamine receptor D1135420520254209677Mouse
1318277Sfxn1sideroflexin 1135422567554262365Mouse
5143086Gm18473predicted gene, 18473135429495254295817Mouse
9648907Gm34640predicted gene, 34640135433181054335788Mouse
401841355LOC132442997STARR-positive B cell enhancer ABC_E8891135434216754342468Mouse
10732Hrh2histamine receptor H2135434599054390201Mouse
401707447LOC131385284STARR-seq mESC enhancer starr_34580135436892754370881Mouse
10000995Gm16578predicted gene 16578135437347254377047Mouse
10032886Gm40955predicted gene, 40955135443726154443010Mouse
39128797Gm48622predicted gene, 48622135444089254547246Mouse
732284Cplx2complexin 2135445544754531736Mouse
401832871LOC132442998STARR-positive B cell enhancer ABC_E5398135447645654476757Mouse
401832393LOC132442999STARR-positive B cell enhancer ABC_E11782135451940454519704Mouse
401836266LOC132443000STARR-positive B cell enhancer ABC_E7240135452058054520881Mouse
163711092LOC128927120CapStarr-seq enhancer MGSCv37_chr13:54548428-54548615135459488054595067Mouse
1323249Thoc3THO complex 3135460665054616653Mouse
401834660LOC132443001STARR-positive B cell enhancer ABC_E10794135462369454623994Mouse
39128650Gm53205predicted gene, 53205135463371954652127Mouse
2308050Gm2830predicted gene 2830135464739154647900Mouse
401838906LOC132443002STARR-positive B cell enhancer ABC_E7241135465124854651549Mouse
1614077Simc1SUMO-interacting motifs containing 1135465153954699103Mouse
16214264833439L19RikRIKEN cDNA 4833439L19 gene135469903154713195Mouse
163653001LOC128927121CapStarr-seq enhancer MGSCv37_chr13:54666808-54666917135471326054713369Mouse
1551746Arl10ADP-ribosylation factor-like 10135472286054730578Mouse
28912658Gm24195predicted gene, 24195135472595254726034Mouse
1313929Nop16NOP16 nucleolar protein135473200454737921Mouse
401841190LOC132443003STARR-positive B cell enhancer ABC_E927135473778954738090Mouse
1618378Higd2aHIG1 domain family, member 2A135473804454738960Mouse
1550649Cltbclathrin light chain B135474019954759186Mouse
401709166LOC131385285STARR-seq mESC enhancer starr_34588135475271754755086Mouse
401715262LOC131385286STARR-seq mESC enhancer starr_34589135475616454757582Mouse
401712473LOC131385287STARR-seq mESC enhancer starr_34590135476339654765487Mouse
163659334LOC128927122STARR-seq mESC enhancer starr_34591135476883554770321Mouse
1315274Faf2Fas associated factor family member 2135476959754811876Mouse
1621594Rn4.5s-ps34.5s RNA, pseudogene 3135480472254804815Mouse
1316272Rnf44ring finger protein 44135482721254841889Mouse
163669638LOC128927123CapStarr-seq enhancer MGSCv37_chr13:54788483-54788694135483493554835146Mouse
163693426LOC128927124CapStarr-seq enhancer MGSCv37_chr13:54789238-54789421135483544554835873Mouse
401835920LOC132443004STARR-positive B cell enhancer ABC_E2408135483592054836221Mouse
401836857LOC132443005STARR-positive B cell enhancer ABC_E3083135484178054842081Mouse
1617254Cdhr2cadherin-related family member 2135484927654884475Mouse
1318723Gprin1G protein-regulated inducer of neurite outgrowth 1135488448454897486Mouse
736763Sncbsynuclein, beta135490667354914435Mouse
401705549LOC131385288STARR-seq mESC enhancer starr_34592135492487254926476Mouse
9676031Gm16249predicted gene 16249135492532754930904Mouse
1614948Eif4e1beukaryotic translation initiation factor 4E family member 1B135493180754936272Mouse
1553676Tspan17tetraspanin 17135493691554944588Mouse
401837026LOC132443006STARR-positive B cell enhancer mm9_chr13:54890539-54890840135493699154937292Mouse

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884393Humsd7_mhumerus midshaft diameter 7, 16 week (mouse)13395000076048119Mouse
1558898Hpi1_mhapatic PMN infiltration 1 (mouse)Not determined13441402553101640Mouse
13463469Gssq1_mglomerulosclerosis severity QTL 1 (mouse)131906090853061050Mouse
12880423V25Dq7_mvitamin D inactive form serum level QTL 7 (mouse)131958398353583983Mouse
1301015Sysbp2_msystolic blood pressure 2 (mouse)Not determined132047761259821605Mouse
4142147Mvwf4_mmodifier of von Willebrand factor 4 (mouse)Not determined20477612112898424Mouse
1357591Tesq1_mtestis weight QTL 1 (mouse)Not determined132061551255720517Mouse
4142009Pregq3_mpregnancy QTL 3 (mouse)Not determined132061551272385189Mouse
10045618Heal17_mwound healing/regeneration 17 (mouse)Not determined132074693954747056Mouse
4142489Ath25_matherosclerosis 25 (mouse)Not determined2583652959836529Mouse
10401111Pgia40_mproteoglycan induced arthritis 40 (mouse)Not determined132791846961918560Mouse
1300710Pcd4ts2_mp-glycoprotein positive CD4 T cell subset 2 (mouse)Not determined132821044262210544Mouse
1357802Vtbt15_mvertebral trabecular bone trait 15 (mouse)Not determined132821737962217515Mouse
10045621Heal21_mwound healing/regeneration 21 (mouse)Not determined132821737962217515Mouse
10755533Chol18_mcholesterol 18 (mouse)133096946764969467Mouse
10755517Chol15_mcholesterol 15 (mouse)133096946764969467Mouse
12738439Twq4_mtestis weight QTL 4 (mouse)133112911065129110Mouse
14696729Kidlq2_mkidney weight, left QTL 2 (mouse)133134473665344736Mouse
1301299Sluc23_msusceptibility to lung cancer 23 (mouse)Not determined133492194368922081Mouse
10412235Scgq5_mspontaneous crescentic glomerulonephritis QTL 5 (mouse)Not determined133606090896239162Mouse
1357587Pfat3_mpredicted fat percentage 3 (mouse)Not determined133610153070101640Mouse
1301734Acsns2_mAngiostrongylus costaricensis nematode susceptibility 2 (mouse)Not determined133610153070101640Mouse
1300561Heal7_mwound healing/regeneration 7 (mouse)Not determined133614482070144904Mouse
1300862Cfbw5_mcystic fibrosis body weight 5 (mouse)Not determined133872035872720517Mouse
1300985Bmd13_mbone mineral density 13 (mouse)Not determined133962924973629397Mouse
1302157Bwem2_mbody weight day 30 males 2 (mouse)Not determined133962924973629397Mouse
1301801Cpfd5_mcerebellum pattern fissures (mouse)Not determined133962924973629397Mouse
15039353Nmrs35_mNAFLD-associated magnetic resonance shift 35 (mouse)134058825374588253Mouse
1300668Pas10_mpulmonary adenoma susceptibility 10 (mouse)Not determined134148904275489158Mouse
4142331Bxs6_mBXSB/MpJ autoimmune nephritis 6 (mouse)Not determined4521044283744746Mouse
10412109Bxs7_mBXSB/MpJ autoimmune nephritis 7 (mouse)Not determined134521044283744746Mouse
26884396Humsd4_mhumerus midshaft diameter 4, 10 week (mouse)134785347673148119Mouse
4142372Moo2_mmodifier of Odc2 (mouse)Not determinedX5031841184318559Mouse
1301666Eae13_msusceptibility to experimental allergic encephalomyelitis 13 (mouse)Not determined135031841184318559Mouse
1300573Elsgp2_melevated serum gp70 2 (mouse)Not determined135061682884617027Mouse
14746975Manh74_mmandible shape 74 (mouse)135247726986477269Mouse
25671382Hrsq4_mhost response to SARS QTL 4, vascular cuffing (mouse)135288165154992738Mouse
1302073Pgct1_mprimordial germ cell tumor locus 1 (mouse)Not determined135382078387820897Mouse


Additional Information

Database Acc Id Source(s)
MGD MGI:6403754 MouseQtl