Alcrsp23 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Alcrsp23 (Alcohol response QTL 23) Rattus norvegicus

Symbol: Alcrsp23
Name: Alcohol response QTL 23
RGD ID: 2317886
Also known as: T30ANGL, SENS30
Trait: response to alcohol trait   (VT:0010489)    
Measurement Type: duration of loss of righting reflex   (CMO:0002289)    
LOD Score: 2.4
P Value: 0.63
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.0296,844,330 - 141,844,330RGD_MAPPER_PIPELINERnor6.0
Cross Type: intercross
Strains Crossed: AT ANT 



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition
ethanol  (IDA)

Measurement Method

Vertebrate Trait

Rat Strain
ANT  (IEA)
AT  (IEA)

References

References - curated
1. Radcliffe RA, etal., Genes Brain Behav. 2009 May 25.

Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D2Rat339)
Rat AssemblyChrPosition (strand)Source
Rnor_6.02119,343,311 - 119,343,459NCBI
Rnor_6.02119,345,196 - 119,345,350NCBI
SHRSP x BN Map243.3098RGD
SHRSP x BN Map243.3098UniSTS


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general number of animals used: 1201 F2 rats; 598 males, 603 females 2317807
qtl_general measurement method: animals were given 3 trials on the inclined plane and the baseline angle was measured, then they were injected with alcohol (15%w/v) 2.0 g/kg and after 30 minutes they were given 3 more trials on the inclined plane 2317807
qtl_general software used: SPSS version 16.0; L/QTL for QTL mapping 2317807
qtl_general this region overlaps with SENS30 locus LOD=2.2 2317807