Vencon9 QTL Report (Rattus norvegicus)

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QTL Registration

General

QTL: Vencon9 (Ventilatory control QTL 9) Rattus norvegicus

Symbol:

Vencon9

Name:

Ventilatory control QTL 9

RGD ID:

2303628

Trait:

respiration trait (VT:0001943)

Measurement Type:

minute ventilation (CMO:0000132)

LOD Score:

Not Available

P Value:

0.005

Variance:

Not Available

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_5.0	19	20,855,340 - 65,855,340	RGD_MAPPER_PIPELINE	Rnor5.0
RGSC_v3.4	19	8,121,935 - 53,121,935	RGD_MAPPER_PIPELINE	RGSC3.4

Cross Type:

intercross

Strains Crossed:

SD/HsdCwr BN/HsdMcwiCwr

Annotation Click to see Annotation Detail View

Experimental Data Annotations Click to see Annotation Detail View

Clinical Measurement

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Vencon9	Rat	minute ventilation		IDA		2303609		RGD

Experimental Condition

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Vencon9	Rat	controlled air oxygen content		IDA		2303609		RGD

Measurement Method

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Vencon9	Rat	air displacement plethysmography		IDA		2303609		RGD

Rat Strain

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Vencon9	Rat	BN/HsdMcwiCwr		IEA		2303609		RGD
Vencon9	Rat	SD/HsdCwr		IEA		2303609		RGD

Vertebrate Trait

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Vencon9	Rat	respiration trait		IDA		2303609		RGD

Experimental Data Annotations Click to see Annotation Detail View

Clinical Measurement

minute ventilation (IDA)

Experimental Condition

controlled air oxygen content (IDA)

Measurement Method

air displacement plethysmography (IDA)

Vertebrate Trait

respiration trait (IDA)

Rat Strain

BN/HsdMcwiCwr (IEA)

SD/HsdCwr (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Data registered by Dr. Moreno	Personal communication between Dr. Carol Moreno and the RGD curators.

Region

Markers in Region

The following Markers overlap with this region.

RGD ID

Symbol

Expected Size

Chr

Start

Stop

Species

Match

Position Markers

Peak: (D19Rat25)

Rat Assembly	Chr	Position (strand)	Source
Rnor_5.0	19	43,355,283 - 43,355,397	NCBI
RGSC_v3.4	19	30,621,879 - 30,621,992	RGD
RGSC_v3.1	19	30,626,705 - 30,626,818	RGD
RH 2.0 Map	19	313.9	RGD
SHRSP x BN Map	19	20.2599	RGD
FHH x ACI Map	19	22.22	RGD
Cytogenetic Map	19		RGD

Additional Information

RGD Curation Notes

Note Type	Note	Reference
qtl_cross_type	intercross

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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QTL: Vencon9 (Ventilatory control QTL 9) Rattus norvegicus