Bp326 QTL Report (Rattus norvegicus) - Rat Genome Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

QTL: Bp326 (Blood pressure QTL 326) Rattus norvegicus

Symbol: Bp326
Name: Blood pressure QTL 326
RGD ID: 2303031
Also known as: region 1
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: mean arterial blood pressure   (CMO:0000009)    
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01314,279,081 - 26,919,398RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01319,518,130 - 32,069,874RGDRnor5.0
RGSC_v3.4131,084,268 - 13,053,933RGDRGSC3.4
Cross Type: intercross
Strains Crossed: SS.BN-(D13Rat7-D13Rat60)/Mcwi 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
Hypotension  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
1. Moreno C, etal., Physiol Genomics. 2007 Jun 12;.
Related QTLs

Related QTL Description Reference
Bp327 interacts with RGD:1625678
Bp328 interacts with RGD:1625678


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1587089LOC679594similar to polyubiquitin131431568414316008Rat
1592077LOC304725similar to contactin associated protein-like 5 isoform 1131437364515396535Rat
7577955LOC102553422cellular tumor antigen p53-like131457963214581237Rat
7529420LOC102553684eukaryotic initiation factor 4A-I-like131504557515047636Rat
11463110LOC108352634endogenous retrovirus group K member 9 Pol protein-like131613101116132946Rat
1585944LOC679645similar to prohibitin131631120816312101Rat
11465046LOC108352613uncharacterized LOC108352613131642037216422370Rat
1593260Hspd1-ps8heat shock protein 1, pseudogene 8131667084416673063Rat
1583413LOC682479hypothetical protein LOC682479131737005317370649Rat
9117769LOC103691598methionine adenosyltransferase 2 subunit beta pseudogene131750239317506264Rat
2321136LOC100360923SET and MYND domain containing 3-like131773961317740347Rat
1597466LOC689020similar to heat shock protein 8131808023818081972Rat
1584807LOC679734similar to 40S ribosomal protein S4, Y isoform 2131861475918615515Rat
9091700LOC103691604uncharacterized LOC103691604131863338718654372Rat
2318305LOC100362382CCDC28A protein-like131920925419210051Rat
1561440RGD1561440similar to nemo like kinase131921159619215319Rat
1594544LOC301971similar to kinesin family member 13A131929350619297889Rat
1333799Olr1826-psolfactory receptor pseudogene 1826131937672819377071Rat
1332803Olr1760-psolfactory receptor pseudogene 1760131942987819430626Rat
7667726LOC102555668igE-binding protein-like132026044420267527Rat
1583661LOC679827similar to Ran-specific GTPase-activating protein (Ran-binding protein 1) (RANBP1) (HpaII tiny fragments locus 9a protein)132037527120446644Rat
11457739LOC108352514uncharacterized LOC108352514132066522220685545Rat
6490239LOC100911899transcription factor BTF3-like132099382620995079Rat
1598145LOC679925similar to family with sequence similarity 51, member A1 homolog132148137721482082Rat
1565194Cntnap5bcontactin associated protein-like 5B132167808822591082Rat
11461461LOC108352515endogenous retrovirus group K member 8 Pol protein-like132252405922526510Rat
11519147LOC108352635endogenous retrovirus group K member 9 Pol protein-like132301789123019640Rat
9400371LOC103691625protein phosphatase 1 regulatory subunit 14B pseudogene132333401923338090Rat
9127255LOC103691606histone H3.3-like132350862823509094Rat
1596843LOC680044similar to High mobility group protein 4 (HMG-4) (High mobility group protein 2a) (HMG-2a)132449678624497814Rat
1305438Cdh20cadherin 20132463029824914463Rat
7498875LOC102547165uncharacterized LOC102547165132489977224913319Rat
9275505LOC103691607uncharacterized LOC103691607132500613425010921Rat
9160875LOC103691608uncharacterized LOC103691608132511330625116329Rat
1305251Rnf152ring finger protein 152132518329525262785Rat
9294666LOC103693667uncharacterized LOC103693667132526214625292751Rat
11487605LOC108352636uncharacterized LOC108352636132547393325477785Rat
6487798LOC100912334ubiquitin-like protein FUBI-like132548237325482716Rat
1311346Pignphosphatidylinositol glycan anchor biosynthesis, class N132551059325662943Rat
1307235RelchRAB11 binding and LisH domain, coiled-coil and HEAT repeat containing132565698325752792Rat
1563614Tnfrsf11aTNF receptor superfamily member 11A132577830625835802Rat
7645713LOC102549134uncharacterized LOC102549134132586025825864748Rat
11469342LOC108352516uncharacterized LOC108352516132586581425875824Rat
7701520LOC102550337uncharacterized LOC102550337132587779825887766Rat
7641700LOC102550524uncharacterized LOC102550524132591813625924487Rat
7514956LOC102550458uncharacterized LOC102550458132592827225953991Rat
1310626Zcchc2zinc finger CCHC-type containing 2132596176226052472Rat
9314479LOC103693665uncharacterized LOC103693665132604822726052472Rat
621308Phlpp1PH domain and leucine rich repeat protein phosphatase 1132614598926394505Rat
9447781LOC103691610uncharacterized LOC103691610132624199626242229Rat
11394992LOC108352518uncharacterized LOC108352518132645308026454083Rat
11465431LOC108352519uncharacterized LOC108352519132650886826519789Rat
2199Bcl2BCL2, apoptosis regulator132660542626769374Rat
7738114LOC102552849uncharacterized LOC102552849132662461526653558Rat
1307775Kdsr3-ketodihydrosphingosine reductase132677938626812271Rat
1305969Vps4bvacuolar protein sorting 4 homolog B132682526126850460Rat
69342Serpinb5serpin family B member 5132690305226923250Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
35975D13Rat7174131427908114279282Ratregion
36922D13Rat4132131444158214441701Ratregion
5503444Trp53329131457997614580304Ratregion
40936D13Rat107249131479188714792141Ratregion
5036921AU049632137131509866115098797Ratregion
5033157RH137803174131515345115153624Ratregion
60549D6Got8165131549415315494317Ratregion
5031708AU047414232131558364015583866Ratregion
39196D13Rat68148131563381815633969Ratregion
1639128D13Got210284131568630615686584Ratregion
1633646D13Got246263131673995316740215Ratregion
5031664AU047559241131675995916760195Ratregion
1631200D13Got265152131759730517597456Ratregion
1631200D13Got265152131761224417612395Ratregion
41198D13Rat127244131799617817996417Ratregion
39228D13Rat89209131808645418086662Ratregion
5068708AU04698292131837022618370317Ratregion
60500D6Got10290131853157218531853Ratregion
1627719D13Got247190131853609718536286Ratregion
34767D13Rat35133131910336019103492Ratregion
5503350Nlk-ps1648131921374019214387Ratregion
5028939RH142898142131929435619294497Ratregion
60726D1Mit25149132011991820120066Ratregion
5035544Ranbp10132044600420446475Ratregion
5503244UniSTS:237455213132044649520446711Ratregion
39778D13Rat134196132063818120638376Ratregion
5063380BI301796196132079595720796152Ratregion
5077742RH139931181132103355321034642Ratregion
5057117AA957791220132103462121034805Ratregion
5067678AU047601173132135458121354753Ratregion
34076D13Mgh1149132148248121482635Ratregion
5089243AU049040154132207639022076543Ratregion
35208D13Rat2165132211390222114054Ratregion
36630D13Rat5162132224008022240241Ratregion
40618D13Rat144153132228677522286913Ratregion
1628857D13Got201166132279553222795697Ratregion
1630306D13Got215168132279553222795699Ratregion
5069136AU046701150132288885622889005Ratregion
5090857AU050007136132376026123760396Ratregion
5053735RH142820173132401461024014786Ratregion
1638308D13Got235210132422060224220811Ratregion
36888D13Rat6143132442868124428823Ratregion
36699D13Rat1290132450196824502279Ratregion
66677D13Mco14250132481907024819581Ratregion
66677D13Mco14250132481934324819581Ratregion
5077272RH139661209132503031925030527Ratregion
5069060AU046749174132508783225088005Ratregion
5080296RH141498198132518355925183756Ratregion
5072162RH136688187132518395325184139Ratregion
5071932RH135368203132518437425184576Ratregion
1629574D13Got217113132533681125336923Ratregion
1638571D13Got27099132533682425336922Ratregion
5067886AU047477186132541476425414949Ratregion
35649D13Rat3162132547483925475015Ratregion
5077966RH140064211132551107925511289Ratregion
5044328RH130540180132551150925511688Ratregion
5048916RH133180203132551391725514119Ratregion
5067310AU047833247132551804925518295Ratregion
5065814BE109920169132557669025576858Ratregion
1635185D13Got214116132560329325603403Ratregion
5504831ha2188868132561004125610908Ratregion
1632298D13Got221194132583701525837205Ratregion
5500991PMC114224P2335132584412725844461Ratregion
5080154RH141416201132585076625850966Ratregion
1631215D13Got258161132586197025862130Ratregion
5050794RH134262211132595063125950841Ratregion
5073268RH137338197132596569825965894Ratregion
5055461RH143814197132602550926025711Ratregion
1633806D13Got239175132606016426060336Ratregion
1629858D13Uwm8118132614760726147724Ratregion
5057257AI555189198132620186326202060Ratregion
66674D13Mco13180132638879826388966Ratregion
5049086RH133278152132639428726394438Ratregion
5067212AU047893284132641276826413051Ratregion
5031806AU047086145132655165926551803Ratregion
5046402RH131732213132665332426653536Ratregion
5035779PMC16825P1703132676856226769264Ratregion
5500971PMC104155P1268132676856426768831Ratregion
5501039PMC125347P1447132676862526769071Ratregion
5503446UniSTS:461954348132676865126768998Ratregion
5031350PMC150726P1294132676882026769113Ratregion
5504614PMC316415P3600132676908126769680Ratregion
5028779RH142296155132676915226769308Ratregion
5044792RH130806201132677264526772845Ratregion
5026732RH133326199132677772926777927Ratregion
5034728BE100511160132677979326779952Ratregion
5077880RH140013218132682528726825504Ratregion
39032D13Rat60131132691927426919398Ratregion
Position Markers

Flank 1: (D13Rat7)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01314,279,081 - 14,279,282NCBI
Rnor_5.01319,518,130 - 19,518,331UniSTS
RGSC_v3.4131,084,269 - 1,084,470UniSTS
RGSC_v3.4131,084,268 - 1,084,470RGD
RGSC_v3.1131,084,268 - 1,084,470RGD
Celera1311,796,004 - 11,796,205UniSTS
SHRSP x BN Map131.1799RGD
SHRSP x BN Map131.1799UniSTS
FHH x ACI Map133.68RGD
Flank 2: (D13Rat60)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01326,919,274 - 26,919,398NCBI
Rnor_5.01332,069,750 - 32,069,874UniSTS
RGSC_v3.41313,053,808 - 13,053,933RGD
RGSC_v3.41313,053,809 - 13,053,933UniSTS
RGSC_v3.11313,053,595 - 13,053,950RGD
Celera1322,859,002 - 22,859,128UniSTS
SHRSP x BN Map133.3799UniSTS
SHRSP x BN Map133.3799RGD
Cytogenetic Map13p13UniSTS


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2317027Aia22Adjuvant induced arthritis QTL 222.29joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)13136779181Rat
738036Lnnr4Liver neoplastic nodule remodeling QTL 43.64liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)13147622148Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)131107975663Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131107975663Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131107975663Rat
631672Iddm12Insulin dependent diabetes mellitus QTL 122.20.0032blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)13901674239373058Rat
61339Bp24Blood pressure QTL 240.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13901674250513953Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13901690682995569Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13901690682995569Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)1312193394108478121Rat
9589141Insul28Insulin level QTL 2810.820.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)131409633059096330Rat
7411662Foco29Food consumption QTL 2920.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)131409633059096330Rat
2303031Bp326Blood pressure QTL 326arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131427908126919398Rat
2317034Aia9Adjuvant induced arthritis QTL 94.62joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)131427908137124697Rat
2317044Aia23Adjuvant induced arthritis QTL 232.3joint integrity trait (VT:0010548)ankle joint diameter (CMO:0002148)131427908137124697Rat
1300163Cardf1Cardiac cell morphology QTL 14.18aorta morphology trait (VT:0000272)artery lesion measurement (CMO:0000975)131444158250799665Rat
2302275Gluco37Glucose level QTL 373.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)131444158251577031Rat
2317040Aia21Adjuvant induced arthritis QTL 212.75joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)131462463159624631Rat
2317046Aia8Adjuvant induced arthritis QTL 83.9700000286102295joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)131462463159624631Rat
631645Bp121Blood pressure QTL 1213.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131981081464810814Rat
9589164Gluco66Glucose level QTL 666.670.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)132005247765052477Rat
1331784Bp222Blood pressure QTL 2222.944arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)132148248158537177Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1324502279108770533Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general number of animals used: 10-15 for each sex 1625678
qtl_general measurement method: 2 days after the implantation of catheter heart rate, systolic, diastolic and mean arterial pressure were recorded 1625678
qtl_general diet: 8.0% NaCl diet was given at 10 weeks of age, 2 weeks before the catheter were implanted 1625678
qtl_general females showed protection from hypertension 1625678
qtl_map 12.4 Mbp 1625678