SADIPOQ7_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: SADIPOQ7_H (Serum adiponectin level QTL 7 (human)) Homo sapiens

Symbol: SADIPOQ7_H
Name: Serum adiponectin level QTL 7 (human)
RGD ID: 2289174
Trait: Hormone level
Measurement Type: adiponectin level
LOD Score: 4.2
P Value: Not Available
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371158,496,495 - 120,828,264RGDGRCh37
Build 361158,253,071 - 120,333,478RGDNCBI36
Cross Type: Not Available
Population Stats: 466 Hispanic children participating in the VIVA LA FAMILIA Study of childhood obesity



Candidate Gene Status
KCNJ1 is a candidate Gene for SADIPOQ7_H
TBRG1 is a candidate Gene for SADIPOQ7_H
TIRAP is a candidate Gene for SADIPOQ7_H
CDON is a candidate Gene for SADIPOQ7_H
ESAM is a candidate Gene for SADIPOQ7_H
CLMP is a candidate Gene for SADIPOQ7_H

References

References - curated
# Reference Title Reference Citation
1. Linkage analysis of circulating levels of adiponectin in Hispanic children. Tejero ME, etal., Int J Obes (Lond). 2007 Mar;31(3):535-42. Epub 2006 Aug 8.

Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Flank 1: (D11S925)
Human AssemblyChrPosition (strand)Source
GRCh3711120,828,268 - 120,828,468UniSTS
GRCh3711120,828,264 - 120,828,438UniSTS
Build 3611120,333,478 - 120,333,678RGD
Celera11117,987,684 - 117,987,884RGD
Celera11117,987,680 - 117,987,854UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map11q23.3UniSTS
HuRef11116,768,153 - 116,768,349UniSTS
HuRef11116,768,157 - 116,768,379UniSTS
Marshfield Genetic Map11118.47RGD
Genethon Genetic Map11123.5UniSTS
TNG Radiation Hybrid Map1156189.0UniSTS
Stanford-G3 RH Map115499.0UniSTS
GeneMap99-GB4 RH Map11395.11UniSTS
Whitehead-RH Map11548.8UniSTS
Whitehead-YAC Contig Map11 UniSTS
NCBI RH Map111024.0UniSTS
GeneMap99-G3 RH Map115499.0UniSTS
Peak: (D11S968)
Human AssemblyChrPosition (strand)Source
GRCh3711133,818,451 - 133,818,601UniSTS
GRCh3711133,818,457 - 133,818,610UniSTS
Build 3611133,323,661 - 133,323,811RGD
Celera11130,992,120 - 130,992,273UniSTS
Celera11130,992,114 - 130,992,264RGD
Cytogenetic Map11q25UniSTS
HuRef11129,772,997 - 129,773,146UniSTS
HuRef11129,772,991 - 129,773,137UniSTS
Marshfield Genetic Map11147.77UniSTS
Marshfield Genetic Map11147.77RGD
Genethon Genetic Map11152.8UniSTS
deCODE Assembly Map11152.45UniSTS
Whitehead-YAC Contig Map11 UniSTS
Flank 2: (D11S956)
Human AssemblyChrPosition (strand)Source
GRCh371158,496,217 - 58,496,495UniSTS
Build 361158,252,793 - 58,253,071RGD
Celera1155,855,308 - 55,855,578RGD
Cytogenetic Map11q12.1UniSTS
HuRef1154,844,080 - 54,844,350UniSTS


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general Study Method: genome-wide scan 1642929
qtl_map chromosome 11, 147.77 cM 1642929
qtl_population 466 Hispanic children participating in the VIVA LA FAMILIA Study of childhood obesity 1642929
qtl_population_details 127 families 1642929
qtl_statistics_details A genome scan was conducted in SOLAR. 1642929