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QTL Registration

General

QTL: Stresp13 (Stress response QTL 13) Rattus norvegicus

Symbol:

Stresp13

Name:

Stress response QTL 13

RGD ID:

1549913

Previously known as:

Sr13; Latency-1

Trait:

stress-related behavior trait (VT:0010451)

Measurement Type:

post-insult time to onset of defensive burying response (CMO:0001962)

LOD Score:

4.56

P Value:

0.0011

Variance:

1.8

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_5.0	1	122,414,658 - 167,414,658	RGD_MAPPER_PIPELINE	Rnor5.0
RGSC_v3.4	2	1 - 23,400,664	RGD_MAPPER_PIPELINE	RGSC3.4

Cross Type:

Not Available

Strains Crossed:

WKY/NHsd F344/NHsd

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

anxiety disorder (IAGP)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal coping response (IAGP)

decreased coping response (IAGP)

increased anxiety-related response (IAGP)

Experimental Data Annotations Click to see Annotation Detail View

Clinical Measurement

post-insult time to onset of defensive burying response (IDA)

Experimental Condition

tactile electric shock exposure (IDA)

Measurement Method

visual assessment of in vivo video recording (IDA)

Vertebrate Trait

stress-related behavior trait (IDA)

Rat Strain

F344/NHsd (IEA)

WKY/NHsd (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Lineage is an epigenetic modifier of QTL influencing behavioral coping with stress.	Ahmadiyeh N, etal., Behav Genet 2005 Mar;35(2):189-98.

Related QTLs

Related QTL	Description	Reference
Despr1	maps to same region	RGD:1358767

Region

Markers in Region

The following Markers overlap with this region.

RGD ID

Symbol

Expected Size

Chr

Start

Stop

Species

Match

Position Markers

Peak: (D2Rat188)

Rat Assembly	Chr	Position (strand)	Source
Rnor_5.0	1	144,914,566 - 144,914,751	NCBI
RGSC_v3.4	2	900,533 - 900,795	UniSTS
Celera	2	23,563 - 23,787	UniSTS
SHRSP x BN Map	2	0.0299	UniSTS
SHRSP x BN Map	2	0.0299	RGD

Additional Information

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2006-04-14	Stresp13	Stress response QTL 13	Sr13		Symbol updated	1299863	APPROVED

RGD Curation Notes

Note Type	Note	Reference
qtl_statistics_details	R/qtl and pseudomarker software were used for linkage analysis	1358767

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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QTL: Stresp13 (Stress response QTL 13) Rattus norvegicus

Mammalian Phenotype