Ncdq1_m QTL Report (Mus musculus) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

QTL: Ncdq1_m (nevus cell density QTL 1 (mouse)) Mus musculus

Symbol: Ncdq1_m
Name: nevus cell density QTL 1 (mouse)
RGD ID: 14700787
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38928,200,000 - 36,200,000MOUSEQTLGRCm38
cM Map9syntenicMOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



References

References - curated
1. Mouse Genome Database (MGD)
Additional References at PubMed
PMID:27155367  


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1313195Arhgap32Rho GTPase activating protein 3293201662532268443Mouse
10172Aplp2amyloid beta (A4) precursor-like protein 293114955731211848Mouse
1322489Pate4prostate and testis expressed 493560709335611885Mouse
1323419Foxred1FAD-dependent oxidoreductase domain containing 193520420835211171Mouse
1320395Fli1Friend leukemia integration 193242220432543432Mouse
1552909Zbtb44zinc finger and BTB domain containing 4493102972031075885Mouse
1551275Dcpsdecapping enzyme, scavenger93512441435175987Mouse
1550758Tmem45btransmembrane protein 45b93142619631464238Mouse
1557897Ntmneurotrimin92899474929963269Mouse
16119011700023A20RikRIKEN cDNA 1700023A20 gene93138500331386048Mouse
1607333Pate13prostate and testis expressed 1393590842335910796Mouse
16092814933422A05RikRIKEN cDNA 4933422A05 gene93528110535285423Mouse
16091134930581F22RikRIKEN cDNA 4930581F22 gene93511672835130922Mouse
1322998Srprsignal recognition particle receptor ('docking protein')93521120335217003Mouse
68551Ddx25DEAD box helicase 2593554184835558470Mouse
1614772Gm1113predicted gene 111393550922235518269Mouse
1614773Prdm10PR domain containing 1093127611031381731Mouse
1318323Adamts8a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 893094256230963838Mouse
1320424Snx19sorting nexin 1993042698830467141Mouse
1320285Adamts15a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1593089915530922452Mouse
1614910Nfrkbnuclear factor related to kappa B binding protein93138616231421333Mouse
16117427630403G23RikRIKEN cDNA 7630403G23 gene93404237134059019Mouse
1617063Gm6762predicted pseudogene 676293557363735574665Mouse
1550578St3gal4ST3 beta-galactoside alpha-2,3-sialyltransferase 493504657635116864Mouse
733375St14suppression of tumorigenicity 14 (colon carcinoma)93108859031131811Mouse
1616175Gm8154predicted gene 815493127846731281947Mouse
62264Kcnj5potassium inwardly-rectifying channel, subfamily J, member 593231470632344380Mouse
1616159Gm8171predicted gene 817193172173131783703Mouse
1617971Pate2prostate and testis expressed 293561180035672889Mouse
736041Opcmlopioid binding protein/cell adhesion molecule-like92779071628925410Mouse
1550407Pus3pseudouridine synthase 393555856035567401Mouse
736363Kcnj1potassium inwardly-rectifying channel, subfamily J, member 193237241832399197Mouse
733697Cdoncell adhesion molecule-related/down-regulated by oncogenes93542152835507652Mouse
1312058Pate6prostate and testis expressed 693578805035790112Mouse
1621640Barx2BarH-like homeobox 293184604431913285Mouse
1550291Rpusd4RNA pseudouridylate synthase domain containing 493526788135275957Mouse
1322815Kirrel3kirre like nephrin family adhesion molecule 393448585335040807Mouse
1622622Gm5916predicted gene 591693611936436128845Mouse
1623112Hyls1HYLS1, centriolar and ciliogenesis associated93556082135570069Mouse
10554Ets1E26 avian leukemia oncogene 1, 5' domain93263624132757820Mouse
1621762Gm7244predicted gene 724493125480231275421Mouse
1622793Tpi-rs4triosephosphate isomerase related sequence 493194834531949632Mouse
1621449Pate5prostate and testis expressed 593583832935844150Mouse
1622649Gm5614predicted gene 561493528146735281870Mouse
1322403Tiraptoll-interleukin 1 receptor (TIR) domain-containing adaptor protein93518439135200291Mouse
2294421Gm8162predicted gene 816293143404631434707Mouse
2295257Gm10105predicted pseudogene 1010593558867835589447Mouse
2295356Gm10698predicted gene 1069893372817533730149Mouse
2299259Gm3331predicted gene 333193278314632834460Mouse
2299706Gm3756predicted gene 375693193529431936855Mouse
10004382Gm39318predicted gene, 3931893519008735193905Mouse
1332352Fam118bfamily with sequence similarity 118, member B93521696535267875Mouse
2299841Gm3434predicted gene 343493613428736135630Mouse
2308192Gm10910predicted gene 1091093128092931281725Mouse
2309607Rps2-ps12ribosomal protein S2, pseudogene 1293051294030513538Mouse
2303907Gm15520predicted gene 1552092903549529091892Mouse
2314441Gm3428predicted gene 342893584854535849880Mouse
5132577Pate3prostate and testis expressed 393564511335648203Mouse
5142731Gm18820predicted gene, 1882093164377031644657Mouse
5143338Gm18226predicted gene, 1822693156773531568246Mouse
5139463Gm17508predicted gene, 1750893108064031082581Mouse
5140550Gm19640predicted gene, 1964093006325330063719Mouse
5144791Pate1prostate and testis expressed 193568507935687371Mouse
5144929Pate10prostate and testis expressed 1093574096035742570Mouse
5144937Pate7prostate and testis expressed 793577652435778109Mouse
5147249Gm16071predicted gene 1607193109418031095041Mouse
9592566Gm29724predicted gene, 2972493098542331003720Mouse
9629588Gm27166predicted gene 2716693303179233090799Mouse
9632189Gm31497predicted gene, 3149793190598731911198Mouse
9635147Gm31013predicted gene, 3101393072208930781955Mouse
9634106Gm30933predicted gene, 3093393038589530426978Mouse
9604181Gm31669predicted gene, 3166993204435232045491Mouse
9605875Gm33974predicted gene, 3397493531795135320362Mouse
9608363Gm31140predicted gene, 3114093087256330879928Mouse
9617783Gm33838predicted gene, 3383893528551435307723Mouse
9616364Gm31408predicted gene, 3140893155969831579785Mouse
9670925Gm31928predicted gene, 3192893263051732632787Mouse
9672585Gm33613predicted gene, 3361393477533934806226Mouse
9673110Gm32171predicted gene, 3217193325446233262518Mouse
9676170Gm33777predicted gene, 3377793469209534711952Mouse
9667223Gm32359predicted gene, 3235993400395734029898Mouse
9644488Gm33561predicted gene, 3356193482324734855194Mouse
9659389Gm31871predicted gene, 3187193259449632607083Mouse
9664036Gm33535predicted gene, 3353593117714831177895Mouse
9657610Gm31755predicted gene, 3175593237012732411753Mouse
10000751Gm15521predicted gene 1552192959052729632697Mouse
10002386Gm27162predicted gene 2716293290406932928966Mouse
10023168Gm39313predicted gene, 3931392836442128396191Mouse
10006954Gm39315predicted gene, 3931592951417329553361Mouse
10035489Gm39316predicted gene, 3931693118777231191579Mouse
10036066Gm39317predicted gene, 3931793234747332361744Mouse
11084032Kirrel3oskirre like nephrin family adhesion molecule 3, opposite strand93491823035007695Mouse
12796585Gm45955predicted gene, 4595593486010134870472Mouse
12795098Gm46106predicted gene, 4610693116023331161219Mouse
15020336Gm51705predicted gene, 5170593505477635059965Mouse
15019367Gm51733predicted gene, 5173393127091031271005Mouse
15554335Gm25630predicted gene, 2563093547488535475046Mouse
15002437Gm47481predicted gene, 4748193204435232044881Mouse
15002730Gm26435predicted gene, 2643593029186830291974Mouse
15001065Gm24262predicted gene, 2426293514463635144779Mouse
15001183Gm25439predicted gene, 2543993391749233917622Mouse
14999175Gm47496predicted gene, 4749693207815832079058Mouse
15001697Gm22060predicted gene, 2206093244682232446928Mouse
39131272LOC115487305small nucleolar RNA SNORA4093001208530012214Mouse
39129312LOC115487216uncharacterized LOC11548721693511720035119544Mouse

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
4895767AU01508621093383824533838454Mouseregion
4895769BB25350711693102900331029118Mouseregion
7197293St1413893108973731089874Mouseregion
7193929ETS1093275760932757723Mouseregion
4893679St148293109570331096537Mouseregion
4895771AU01496520093613601136136210Mouseregion
4895771AU01496520093585031735850518Mouseregion
4895773AU02204822693131476231314987Mouseregion
4900776RH13027515293512129635121447Mouseregion
4901171RH13331920192892508828925288Mouseregion
4904791AI79069814693114978231149927Mouseregion
4904793X594217593242365332423727Mouseregion
4904787AI8482089793046545730465553Mouseregion
4904795AI45031710993138143131381539Mouseregion
4904797AW0470469493554195735542050Mouseregion
4901547SHGC-15233932093131999831320317Mouseregion
491492929.MMHAP14FLB5.seq18293363461933634800Mouseregion
491475126.MMHAP84FRA11.seq20093379828633798485Mouseregion
491539134.MMHAP23FLD4.seq15192912290029123050Mouseregion
491595540.MMHAP25FLF4.seq16793224420332244369Mouseregion
4908481C8701811092820083528200944Mouseregion
491300507.MMHAP31FLC1.seq16693253418032534345Mouseregion
491326710.MMHAP16FRD7.seq16793447572134475887Mouseregion
491612541.MMHAP97FRF11.seq16193232443432324594Mouseregion
4917264MDB055615292899610428996254Mouseregion
4917396MHAa22e3.seq19293375737833757569Mouseregion
4917388MHAa21d4.seq17993493618534936363Mouseregion
4908483AW98611213893512654435126681Mouseregion
491285905.MMHAP38FLB2.seq18393450884634509028Mouseregion
491485327.MMHAP9FRA12.seq15793480211734802273Mouseregion
4947743UniSTS:23608921393556691035567122Mouseregion
4936928RH12465324793518459335184839Mouseregion
4938068RH12522515392899609728996249Mouseregion
4930290D9Mit12714593545218235452326Mouseregion
4930881D9Mit8820293050339830503599Mouseregion
4930308D9Mit13812192948906029489180Mouseregion
4930428D9Mit18813493136026231360395Mouseregion
4930561D9Mit244.214092955686329557002Mouseregion
4930665D9Mit29612592894556928945693Mouseregion
4930713D9Mit3258793419332334193409Mouseregion
4930835D9Mit6512592859203728592161Mouseregion
4930883D9Mit8914592945867429458818Mouseregion
4933739C7657811893527571435275831Mouseregion
4933741AF0908668993550421635504304Mouseregion
4939055RH12579914193512444735124587Mouseregion
4930837D9Mit6612493492645234926575Mouseregion
7198483Hyls154793556121035561756Mouseregion
4930511D9Mit225.211093536952435369634Mouseregion
4930559MT209414792955677229556918Mouseregion
4930669D9Mit29710493406754434067647Mouseregion
4930709D9Mit32424592881918728819432Mouseregion
4930797D9Mit4221292932102329321234Mouseregion
4930833D9Mit6310292855567728555778Mouseregion
4933737L7790013893184655231846689Mouseregion
4947735UniSTS:23608428993142087231421160Mouseregion
4947737UniSTS:23608524293089985430900095Mouseregion
4947739UniSTS:23608617993115031931150497Mouseregion
4947741UniSTS:23608820193550464735504847Mouseregion
4948669UniSTS:23663139393521398935214883Mouseregion
4959492AI44861712293275484532754966Mouseregion
4963348UniSTS:22436616493307199333072156Mouseregion
4963643UniSTS:22452715492998439729984550Mouseregion
4964116UniSTS:22478616793352553033525696Mouseregion
4954262D9Mit9014093250045532500594Mouseregion
4964602UniSTS:22505019992974280129742999Mouseregion
4955379RH12599920293527575535275956Mouseregion
4959490AI19600014293275755232757693Mouseregion
4962942RH14191316593512448235124646Mouseregion
4952702PMC126621P128093505419935054478Mouseregion
4954256D9Mit6419092859203928592228Mouseregion
4956081RH12635521393116037731160586Mouseregion
4957668AI84436611592892499528925109Mouseregion
5012821AU04858113993514330135143439Mouseregion
4969807Aplp139293114965031150051Mouseregion
5004698Siat4c45093505312535054753Mouseregion
7193428Tmed237893372833233728709Mouseregion
5013234fb98c02.x126993488020834880476Mouseregion
4984149PMC86032P131093242391432424223Mouseregion
5005592Kcnj512693231758032317705Mouseregion
5001273RH4797616193556554535565705Mouseregion
5012963RH6904212292892010128920222Mouseregion
5001513GDB:19786315093521395735214237Mouseregion
5002312WS2913493275759932757732Mouseregion
5003692D8Got3018292878804828788229Mouseregion
5004431Fli114593242373932423883Mouseregion
7197925X594219993242365732423755Mouseregion
5134594Adamts843793096200430962440Mouseregion
5494329UniSTS:23663031793521125835212432Mouseregion
5495097G38154093110746531109062Mouseregion
5499380RH13870017293275281032754276Mouseregion

QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300899Chol6_mcholesterol 6 (mouse)Not determined9129902908Mouse
13434920Dcollq1_mdifferential colonization level QTL 1 (mouse)9130430544Mouse
1300849Sles4_msystemic lupus erythmatosus suppressor 4 (mouse)Not determined9910756137395074Mouse
13504833Bglu19_mblood glucose level 19 (mouse)9999947243999472Mouse
1300532Tbs2_mtuberculosis severity 2 (mouse)Not determined91245867446458818Mouse
10043917Obq37_mobesity QTL 37 (mouse)Not determined91347987947479879Mouse
1357637Si5lq2_mserum IGFBP-5 level QTL 2 (mouse)Not determined91550045549500594Mouse
4141447Cfmq2_mcystic fibrosis modifier QTL 2 (mouse)Not determined91550045549500594Mouse
4141591Cq4_mcholesterol QTL 4 (mouse)Not determined91550045549500594Mouse
1301421Lgth4_mbody length 4 (mouse)Not determined91550045549500594Mouse
11354951Pdcc3_mplasmacytoid dentritic cell compartment 3 (mouse)91583833149838331Mouse
12790993Adq1_maortic diameter QTL 1 (mouse)91583833149838331Mouse
12790997Adq2_maortic diameter QTL 2 (mouse)91583833149838331Mouse
12880415V125Dq7_mvitamin D active form serum level QTL 7 (mouse)91610000050100000Mouse
12880416V125Dq8_mvitamin D active form serum level QTL 8 (mouse)91610000050100000Mouse
13504834Hdlq109_mHDL QTL 109 (mouse)91679834550798345Mouse
1357465Vtbt6_mvertebral trabecular bone trait 6 (mouse)Not determined91706754451067647Mouse
1300643Pvcan2_mprotection against vaginal candidiasis 2 (mouse)Not determined92003211054032229Mouse
1301439Morph2_mmorphine antinociception 2 (mouse)Not determined92024206654242196Mouse
1301045Sluc10_msusceptibility to lung cancer 10 (mouse)Not determined92039490154395074Mouse
1301883Skull12_mskull morphology 12 (mouse)Not determined92039490154395074Mouse
4142352Lmr17_mleishmaniasis resistance 17 (mouse)Not determined92039490154395074Mouse
10043950Pbft5_mpercent body fat 5 (mouse)Not determined92039490154395074Mouse
12904939Edlmmq8_mextensor digitorum longus muscle mass QTL 8 (mouse)92094144454941444Mouse
13208563Bmiq8_mbody mass index QTL 8 (mouse)92500000069000000Mouse
11532694Sluc39a_msusceptibility to lung cancer 39a (mouse)92567618959676285Mouse
11532695Sluc39b_msusceptibility to lung cancer 39b (mouse)92567618959676285Mouse
11532696Sluc39c_msusceptibility to lung cancer 39c (mouse)92567618959676285Mouse
11532712Sluc39d_msusceptibility to lung cancer 39d (mouse)92567618959676285Mouse
1300932Hdlq17_mHDL QTL 17 (mouse)Not determined92688512460885255Mouse
10043867Mtbcq9_mmultiple trait body composition QTL 9 (mouse)Not determined92688512460885255Mouse
10043987Stheal13_msoft tissue heal 13 (mouse)Not determined92688512460885255Mouse
10043878Adip20_madiposity 20 (mouse)Not determined92733989761340026Mouse
14700787Ncdq1_mnevus cell density QTL 1 (mouse)92820000036200000Mouse
1301000Obq5_mobesity QTL 5 (mouse)Not determined92859203741888030Mouse
10043847Hdlq89_mHDL QTL 89 (mouse)Not determined92938163163381774Mouse
1301782Chol11_mcholesterol 11 (mouse)Not determined92938163163381774Mouse
11353829Paasd1_mpeak activity after sleep deprivation 1 (mouse)92994941730285916Mouse
1301365Ap5q_malcohol preference 5 QTL (mouse)Not determined93014186664141979Mouse
1558949Igan3_mIgA nephropathy 3 (mouse)Not determined93050339840654618Mouse
1357746Vtbt7_mvertebral trabecular bone trait 7 (mouse)Not determined93082861764828723Mouse
4142455Elnv_mepilepsy naive (mouse)Not determined93136026237395074Mouse
1302180Actd4_mactivity-distance traveled 4 (mouse)Not determined93252326366523557Mouse
4141148Cq5_mcholesterol QTL 5 (mouse)Not determined93254112166541246Mouse
1301692Hts_mhypothermia sensitivity (mouse)Not determined93259987266600121Mouse
4141323Ptnu3_mproteinuria 3 (mouse)Not determined93297840266978536Mouse
1357709Si5lq3_mserum IGFBP-5 level QTL 3 (mouse)Not determined93319972567199840Mouse
1558872Ibdq1_minflammatory bowel disease QTL 1 (mouse)Not determined93406754473531973Mouse
1357682Phdlc1_mplasma HDL cholesterol 1 (mouse)Not determined93419332342853570Mouse
1300868Tlf_mT lymphocyte fraction (mouse)Not determined93492645237395074Mouse
1301252Etohc3_methanol consumption 3 (mouse)Not determined93512317869123299Mouse
1301972Cocrb8_mcocaine related behavior 8 (mouse)Not determined93512317869123299Mouse
1558968Tbdr1_mbody temperature response to dietary restriction, QTL 1 (mouse)Not determined93512317869123299Mouse


Additional Information

Database Acc Id Source(s)
MGD MGI:6342082 MouseQtl